PlantSME Plant secondary metabolism enzyme database

Lonicera japonica (lonicera_japonica)

Imported from atlas release summary for Lonicera japonica.

2547
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 878 20 UGT (373) View species results
Alkaloid pathway 625 24 7DLGT (175) View species results
Phenylpropanoid pathway 422 13 POD (148) View species results
Flavonoid pathway 377 15 UFGT (279) View species results
Steroid pathway 138 13 CAS (71) View species results
Rosmarinic acid pathway 107 7 C4H (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2159 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 356 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
LONjap04G0026670.1 Alkaloid 7DLGT low borderline
LONjap04G0026680.1 Alkaloid 7DLGT low borderline
LONjap04G0026690.1 Alkaloid 7DLGT medium pass
LONjap04G0030660.1 Alkaloid 7DLGT low borderline
LONjap04G0030680.1 Alkaloid 7DLGT low borderline
LONjap04G0030690.1 Alkaloid 7DLGT low borderline
LONjap04G0030740.1 Alkaloid 7DLGT medium pass
LONjap04G0032370.1 Alkaloid 7DLGT medium pass
LONjap04G0032380.1 Alkaloid 7DLGT medium pass
LONjap04G0032390.1 Alkaloid 7DLGT medium pass
LONjap05G0007320.1 Alkaloid 7DLGT high pass
LONjap05G0008640.1 Alkaloid 7DLGT low borderline
LONjap05G0008650.1 Alkaloid 7DLGT low borderline
LONjap05G0014030.1 Alkaloid 7DLGT high pass
LONjap05G0014040.1 Alkaloid 7DLGT high pass
LONjap05G0014070.1 Alkaloid 7DLGT low borderline
LONjap05G0014080.1 Alkaloid 7DLGT medium pass
LONjap05G0014250.1 Alkaloid 7DLGT medium pass
LONjap05G0015800.1 Alkaloid 7DLGT high pass
LONjap05G0015810.1 Alkaloid 7DLGT high pass
LONjap05G0019560.1 Alkaloid 7DLGT low borderline
LONjap05G0019810.1 Alkaloid 7DLGT medium pass
LONjap05G0024790.1 Alkaloid 7DLGT medium pass
LONjap05G0024840.1 Alkaloid 7DLGT medium pass
LONjap05G0024850.1 Alkaloid 7DLGT low borderline
LONjap05G0024870.1 Alkaloid 7DLGT low borderline
LONjap05G0024910.1 Alkaloid 7DLGT low borderline
LONjap05G0024930.1 Alkaloid 7DLGT low borderline
LONjap05G0024980.1 Alkaloid 7DLGT medium pass
LONjap05G0025000.1 Alkaloid 7DLGT low borderline
LONjap05G0025010.1 Alkaloid 7DLGT low borderline
LONjap05G0025020.1 Alkaloid 7DLGT low borderline
LONjap06G0000580.1 Alkaloid 7DLGT medium pass
LONjap06G0000600.1 Alkaloid 7DLGT low borderline
LONjap06G0000800.1 Alkaloid 7DLGT medium pass
LONjap06G0000820.1 Alkaloid 7DLGT medium pass
LONjap06G0000910.1 Alkaloid 7DLGT medium pass
LONjap06G0000930.1 Alkaloid 7DLGT medium pass
LONjap06G0005890.1 Alkaloid 7DLGT high pass
LONjap06G0005900.1 Alkaloid 7DLGT medium pass
LONjap06G0007620.1 Alkaloid 7DLGT high pass
LONjap06G0007630.1 Alkaloid 7DLGT medium pass
LONjap06G0007650.1 Alkaloid 7DLGT medium pass
LONjap06G0007660.1 Alkaloid 7DLGT medium pass
LONjap06G0007670.1 Alkaloid 7DLGT medium pass
LONjap06G0007680.1 Alkaloid 7DLGT high pass
LONjap06G0007690.1 Alkaloid 7DLGT medium pass
LONjap06G0007710.1 Alkaloid 7DLGT high pass
LONjap06G0007730.1 Alkaloid 7DLGT high pass
LONjap06G0007740.1 Alkaloid 7DLGT medium pass