PlantSME Plant secondary metabolism enzyme database

Lonicera japonica (lonicera_japonica)

Imported from atlas release summary for Lonicera japonica.

2714
Candidate Protein Records
2547
Pathway-Level Records
5787
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 878 20 UGT (373) View species results
Alkaloid pathway 625 24 7DLGT (175) View species results
Phenylpropanoid pathway 422 13 POD (148) View species results
Flavonoid pathway 377 15 UFGT (279) View species results
Steroid pathway 138 13 CAS (71) View species results
Rosmarinic acid pathway 107 7 C4H (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2159 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 356 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
LONjapGWHAAZE000000220003350.1 Alkaloid 7DLGT low borderline
LONjapGWHAAZE000000400004940.1 Alkaloid 7DLGT low borderline
LONjapGWHAAZE000000400004960.1 Alkaloid 7DLGT low borderline
LONjapGWHAAZE000000400004970.1 Alkaloid 7DLGT medium pass
LONjapGWHAAZE000000400004980.1 Alkaloid 7DLGT low borderline
LONjapGWHAAZE000000440005380.1 Alkaloid 7DLGT medium pass
LONjapGWHAAZE000000940008470.1 Alkaloid 7DLGT high pass
LONjapGWHAAZE000000940008480.1 Alkaloid 7DLGT medium pass
LONjapGWHAAZE000000940008490.1 Alkaloid 7DLGT low borderline
LONjapGWHAAZE000000940010140.1 Alkaloid 7DLGT low borderline
LONjapGWHAAZE000001080013350.1 Alkaloid 7DLGT medium pass
LONjapGWHAAZE000001080013360.1 Alkaloid 7DLGT low borderline
LONjap01G0005510.1 Alkaloid 7DLH medium borderline
LONjap01G0005530.1 Alkaloid 7DLH medium borderline
LONjap01G0005540.1 Alkaloid 7DLH medium borderline
LONjap01G0008150.1 Alkaloid 7DLH low borderline
LONjap01G0008190.1 Alkaloid 7DLH low borderline
LONjap01G0008240.1 Alkaloid 7DLH low borderline
LONjap01G0018430.1 Alkaloid 7DLH medium borderline
LONjap01G0018440.1 Alkaloid 7DLH medium borderline
LONjap01G0018450.1 Alkaloid 7DLH medium borderline
LONjap01G0018460.1 Alkaloid 7DLH medium borderline
LONjap01G0018480.1 Alkaloid 7DLH medium borderline
LONjap01G0018490.1 Alkaloid 7DLH medium borderline
LONjap01G0018500.1 Alkaloid 7DLH medium borderline
LONjap01G0018510.1 Alkaloid 7DLH medium borderline
LONjap01G0018520.1 Alkaloid 7DLH medium borderline
LONjap01G0018570.1 Alkaloid 7DLH medium borderline
LONjap01G0018580.1 Alkaloid 7DLH medium borderline
LONjap01G0018610.1 Alkaloid 7DLH medium borderline
LONjap01G0018630.1 Alkaloid 7DLH medium borderline
LONjap01G0018640.1 Alkaloid 7DLH medium pass
LONjap01G0018650.1 Alkaloid 7DLH medium borderline
LONjap01G0018660.1 Alkaloid 7DLH medium borderline
LONjap01G0018700.1 Alkaloid 7DLH medium borderline
LONjap01G0018730.1 Alkaloid 7DLH medium borderline
LONjap01G0018750.1 Alkaloid 7DLH medium borderline
LONjap01G0019000.1 Alkaloid 7DLH medium borderline
LONjap01G0019010.1 Alkaloid 7DLH medium borderline
LONjap01G0019020.1 Alkaloid 7DLH medium borderline
LONjap01G0019030.1 Alkaloid 7DLH medium borderline
LONjap01G0019050.1 Alkaloid 7DLH medium borderline
LONjap01G0019060.1 Alkaloid 7DLH medium borderline
LONjap01G0019070.1 Alkaloid 7DLH medium borderline
LONjap01G0019080.1 Alkaloid 7DLH medium borderline
LONjap01G0019090.1 Alkaloid 7DLH medium borderline
LONjap01G0019110.1 Alkaloid 7DLH medium borderline
LONjap01G0019120.1 Alkaloid 7DLH medium borderline
LONjap01G0019140.1 Alkaloid 7DLH medium borderline
LONjap01G0019170.1 Alkaloid 7DLH medium borderline