PlantSME Plant secondary metabolism enzyme database

Lonicera japonica (lonicera_japonica)

Imported from atlas release summary for Lonicera japonica.

2714
Candidate Protein Records
2547
Pathway-Level Records
5787
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 878 20 UGT (373) View species results
Alkaloid pathway 625 24 7DLGT (175) View species results
Phenylpropanoid pathway 422 13 POD (148) View species results
Flavonoid pathway 377 15 UFGT (279) View species results
Steroid pathway 138 13 CAS (71) View species results
Rosmarinic acid pathway 107 7 C4H (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2159 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 356 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
LONjap01G0019190.1 Alkaloid 7DLH medium borderline
LONjap01G0019240.1 Alkaloid 7DLH medium borderline
LONjap01G0019250.1 Alkaloid 7DLH medium pass
LONjap01G0019280.1 Alkaloid 7DLH medium borderline
LONjap01G0019300.1 Alkaloid 7DLH medium borderline
LONjap01G0019320.1 Alkaloid 7DLH medium borderline
LONjap01G0019340.1 Alkaloid 7DLH medium borderline
LONjap01G0025720.1 Alkaloid 7DLH medium borderline
LONjap01G0025740.1 Alkaloid 7DLH medium borderline
LONjap01G0033870.1 Alkaloid 7DLH medium borderline
LONjap02G0001680.1 Alkaloid 7DLH medium borderline
LONjap02G0010780.1 Alkaloid 7DLH medium borderline
LONjap02G0029710.1 Alkaloid 7DLH medium borderline
LONjap02G0043650.1 Alkaloid 7DLH medium borderline
LONjap02G0044990.1 Alkaloid 7DLH medium borderline
LONjap02G0045000.1 Alkaloid 7DLH medium borderline
LONjap02G0045010.1 Alkaloid 7DLH medium borderline
LONjap03G0009560.1 Alkaloid 7DLH high pass
LONjap03G0030290.1 Alkaloid 7DLH medium borderline
LONjap03G0032240.1 Alkaloid 7DLH medium borderline
LONjap03G0032250.1 Alkaloid 7DLH medium borderline
LONjap03G0032260.1 Alkaloid 7DLH medium borderline
LONjap03G0032270.1 Alkaloid 7DLH medium borderline
LONjap04G0017340.1 Alkaloid 7DLH low borderline
LONjap04G0032170.1 Alkaloid 7DLH medium borderline
LONjap06G0023830.1 Alkaloid 7DLH medium borderline
LONjap07G0026830.1 Alkaloid 7DLH medium borderline
LONjap08G0000610.1 Alkaloid 7DLH medium borderline
LONjap08G0000620.1 Alkaloid 7DLH medium borderline
LONjap08G0008400.1 Alkaloid 7DLH medium borderline
LONjap08G0008410.1 Alkaloid 7DLH medium borderline
LONjap08G0008420.1 Alkaloid 7DLH medium borderline
LONjap08G0018640.1 Alkaloid 7DLH low borderline
LONjap08G0027010.1 Alkaloid 7DLH low borderline
LONjap09G0024250.1 Alkaloid 7DLH medium borderline
LONjap01G0003960.1 Alkaloid 8HGO medium borderline
LONjap01G0037550.1 Alkaloid 8HGO medium borderline
LONjap02G0009190.1 Alkaloid 8HGO medium borderline
LONjap03G0023880.1 Alkaloid 8HGO medium borderline
LONjap04G0000640.1 Alkaloid 8HGO medium borderline
LONjap04G0004320.1 Alkaloid 8HGO low borderline
LONjap04G0005230.1 Alkaloid 8HGO medium borderline
LONjap04G0028770.1 Alkaloid 8HGO medium pass
LONjap04G0028780.1 Alkaloid 8HGO medium pass
LONjap04G0028790.1 Alkaloid 8HGO medium pass
LONjap04G0030980.1 Alkaloid 8HGO medium borderline
LONjap04G0030990.1 Alkaloid 8HGO medium borderline
LONjap04G0031000.1 Alkaloid 8HGO medium borderline
LONjap05G0010660.1 Alkaloid 8HGO medium borderline
LONjap05G0031580.1 Alkaloid 8HGO medium borderline