PlantSME Plant secondary metabolism enzyme database

Lonicera japonica (lonicera_japonica)

Imported from atlas release summary for Lonicera japonica.

2547
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 878 20 UGT (373) View species results
Alkaloid pathway 625 24 7DLGT (175) View species results
Phenylpropanoid pathway 422 13 POD (148) View species results
Flavonoid pathway 377 15 UFGT (279) View species results
Steroid pathway 138 13 CAS (71) View species results
Rosmarinic acid pathway 107 7 C4H (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2159 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 356 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
LONjapGWHAAZE000000360004550.1 Phenylpropanoid C3'H/CYP98A low borderline
LONjapGWHAAZE000000530005990.1 Phenylpropanoid C3'H/CYP98A low borderline
LONjapGWHAAZE000000530006010.1 Phenylpropanoid C3'H/CYP98A medium borderline
LONjapGWHAAZE000000770007250.1 Phenylpropanoid C3'H/CYP98A low borderline
LONjapGWHAAZE000001080013400.1 Phenylpropanoid C3'H/CYP98A low borderline
LONjapGWHAAZE000001200014600.1 Phenylpropanoid C3'H/CYP98A medium pass
LONjapGWHAAZE000001350015310.1 Phenylpropanoid C3'H/CYP98A low borderline
LONjapGWHAAZE000001360015330.1 Phenylpropanoid C3'H/CYP98A low borderline
LONjapGWHAAZE000001360015340.1 Phenylpropanoid C3'H/CYP98A low borderline
LONjapGWHAAZE000001390015600.1 Phenylpropanoid C3'H/CYP98A low borderline
LONjap01G0005650.1 Phenylpropanoid C4H/CYP73A medium borderline
LONjap01G0005760.1 Phenylpropanoid C4H/CYP73A low borderline
LONjap01G0005770.1 Phenylpropanoid C4H/CYP73A low borderline
LONjap01G0005780.1 Phenylpropanoid C4H/CYP73A low borderline
LONjap01G0005820.1 Phenylpropanoid C4H/CYP73A low borderline
LONjap01G0005840.1 Phenylpropanoid C4H/CYP73A low borderline
LONjap01G0024870.1 Phenylpropanoid C4H/CYP73A low borderline
LONjap01G0024880.1 Phenylpropanoid C4H/CYP73A low borderline
LONjap01G0024910.1 Phenylpropanoid C4H/CYP73A low borderline
LONjap01G0028290.1 Phenylpropanoid C4H/CYP73A low borderline
LONjap02G0028990.1 Phenylpropanoid C4H/CYP73A low borderline
LONjap02G0036400.1 Phenylpropanoid C4H/CYP73A medium pass
LONjap02G0044770.1 Phenylpropanoid C4H/CYP73A medium borderline
LONjap02G0045990.1 Phenylpropanoid C4H/CYP73A medium borderline
LONjap03G0008970.1 Phenylpropanoid C4H/CYP73A low borderline
LONjap03G0009250.1 Phenylpropanoid C4H/CYP73A low borderline
LONjap03G0009410.1 Phenylpropanoid C4H/CYP73A low borderline
LONjap03G0012350.1 Phenylpropanoid C4H/CYP73A low borderline
LONjap03G0012480.1 Phenylpropanoid C4H/CYP73A low borderline
LONjap04G0002620.1 Phenylpropanoid C4H/CYP73A low borderline
LONjap04G0027320.1 Phenylpropanoid C4H/CYP73A low borderline
LONjap04G0027330.1 Phenylpropanoid C4H/CYP73A low borderline
LONjap04G0030310.1 Phenylpropanoid C4H/CYP73A low borderline
LONjap05G0008270.1 Phenylpropanoid C4H/CYP73A low borderline
LONjap05G0008280.1 Phenylpropanoid C4H/CYP73A low borderline
LONjap05G0022240.1 Phenylpropanoid C4H/CYP73A low borderline
LONjap05G0022260.1 Phenylpropanoid C4H/CYP73A low borderline
LONjap05G0022290.1 Phenylpropanoid C4H/CYP73A low borderline
LONjap05G0022310.1 Phenylpropanoid C4H/CYP73A low borderline
LONjap05G0022410.1 Phenylpropanoid C4H/CYP73A low borderline
LONjap05G0022430.1 Phenylpropanoid C4H/CYP73A low borderline
LONjap05G0028970.1 Phenylpropanoid C4H/CYP73A medium pass
LONjap05G0029390.1 Phenylpropanoid C4H/CYP73A medium pass
LONjap05G0029400.1 Phenylpropanoid C4H/CYP73A medium borderline
LONjap05G0029410.1 Phenylpropanoid C4H/CYP73A medium pass
LONjap06G0002770.1 Phenylpropanoid C4H/CYP73A low borderline
LONjap06G0023830.1 Phenylpropanoid C4H/CYP73A medium borderline
LONjap07G0001210.1 Phenylpropanoid C4H/CYP73A low borderline
LONjap07G0001240.1 Phenylpropanoid C4H/CYP73A low borderline
LONjap07G0001260.1 Phenylpropanoid C4H/CYP73A low borderline