PlantSME Plant secondary metabolism enzyme database

Lonicera japonica (lonicera_japonica)

Imported from atlas release summary for Lonicera japonica.

2714
Candidate Protein Records
2547
Pathway-Level Records
5787
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 878 20 UGT (373) View species results
Alkaloid pathway 625 24 7DLGT (175) View species results
Phenylpropanoid pathway 422 13 POD (148) View species results
Flavonoid pathway 377 15 UFGT (279) View species results
Steroid pathway 138 13 CAS (71) View species results
Rosmarinic acid pathway 107 7 C4H (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2159 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 356 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
LONjap07G0001270.1 Phenylpropanoid C4H/CYP73A low borderline
LONjap07G0001290.1 Phenylpropanoid C4H/CYP73A low borderline
LONjap07G0001300.1 Phenylpropanoid C4H/CYP73A low borderline
LONjap07G0001350.1 Phenylpropanoid C4H/CYP73A low borderline
LONjap07G0001360.1 Phenylpropanoid C4H/CYP73A low borderline
LONjap07G0001400.1 Phenylpropanoid C4H/CYP73A low borderline
LONjap07G0001410.1 Phenylpropanoid C4H/CYP73A low borderline
LONjap07G0001420.1 Phenylpropanoid C4H/CYP73A low borderline
LONjap08G0004590.1 Phenylpropanoid C4H/CYP73A low borderline
LONjap08G0014090.1 Phenylpropanoid C4H/CYP73A low borderline
LONjap08G0014250.1 Phenylpropanoid C4H/CYP73A low borderline
LONjap08G0016170.1 Phenylpropanoid C4H/CYP73A low borderline
LONjap08G0016180.1 Phenylpropanoid C4H/CYP73A low borderline
LONjap08G0021530.1 Phenylpropanoid C4H/CYP73A low borderline
LONjap08G0027010.1 Phenylpropanoid C4H/CYP73A low borderline
LONjap09G0014940.1 Phenylpropanoid C4H/CYP73A low borderline
LONjapGWHAAZE000000150000420.1 Phenylpropanoid C4H/CYP73A low borderline
LONjapGWHAAZE000000160000630.1 Phenylpropanoid C4H/CYP73A medium borderline
LONjapGWHAAZE000001350015300.1 Phenylpropanoid C4H/CYP73A low borderline
LONjapGWHAAZE000001360015320.1 Phenylpropanoid C4H/CYP73A low borderline
LONjap01G0003960.1 Phenylpropanoid CAD low borderline
LONjap01G0005350.1 Phenylpropanoid CAD medium pass
LONjap01G0011080.1 Phenylpropanoid CAD low borderline
LONjap01G0011890.1 Phenylpropanoid CAD low borderline
LONjap01G0011910.1 Phenylpropanoid CAD low borderline
LONjap01G0013300.1 Phenylpropanoid CAD medium borderline
LONjap01G0013310.1 Phenylpropanoid CAD medium borderline
LONjap01G0013320.1 Phenylpropanoid CAD medium borderline
LONjap01G0013330.1 Phenylpropanoid CAD medium borderline
LONjap01G0015230.1 Phenylpropanoid CAD low borderline
LONjap01G0015250.1 Phenylpropanoid CAD low borderline
LONjap01G0015510.1 Phenylpropanoid CAD low borderline
LONjap01G0015540.1 Phenylpropanoid CAD low borderline
LONjap01G0015560.1 Phenylpropanoid CAD low borderline
LONjap01G0017830.1 Phenylpropanoid CAD low borderline
LONjap01G0017900.1 Phenylpropanoid CAD low borderline
LONjap01G0017920.1 Phenylpropanoid CAD low borderline
LONjap01G0017950.1 Phenylpropanoid CAD low borderline
LONjap01G0017960.1 Phenylpropanoid CAD low borderline
LONjap01G0025940.1 Phenylpropanoid CAD medium pass
LONjap01G0033850.1 Phenylpropanoid CAD low borderline
LONjap01G0047670.1 Phenylpropanoid CAD medium pass
LONjap01G0047680.1 Phenylpropanoid CAD low borderline
LONjap01G0047700.1 Phenylpropanoid CAD low borderline
LONjap01G0047740.1 Phenylpropanoid CAD medium borderline
LONjap02G0000460.1 Phenylpropanoid CAD low borderline
LONjap02G0000470.1 Phenylpropanoid CAD low borderline
LONjap02G0008800.1 Phenylpropanoid CAD medium pass
LONjap02G0008820.1 Phenylpropanoid CAD medium pass
LONjap02G0008840.1 Phenylpropanoid CAD medium pass