PlantSME Plant secondary metabolism enzyme database

Oryza glaberrima (oryza_glaberrima)

Imported from atlas release summary for Oryza glaberrima.

1650
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 457 19 UGT (179) View species results
Alkaloid pathway 371 23 7DLGT (76) View species results
Phenylpropanoid pathway 341 13 POD (176) View species results
Flavonoid pathway 266 13 UFGT (169) View species results
Rosmarinic acid pathway 129 7 C4H (67) View species results
Steroid pathway 86 14 SMT1/SMT2/SMT3 (36) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1542 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 283 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BR6OX2/CYP85A2
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Gene Pathway Family Confidence Status
ORGLA06G0185800.1 Steroid BR6OX2/CYP85A2 low borderline
ORGLA06G0186500.1 Steroid BR6OX2/CYP85A2 low borderline
ORGLA07G0187700.1 Steroid BR6OX2/CYP85A2 low borderline
ORGLA07G0231800.1 Steroid BR6OX2/CYP85A2 low borderline
ORGLA07G0244100.1 Steroid BR6OX2/CYP85A2 low borderline
ORGLA08G0014600.1 Steroid BR6OX2/CYP85A2 low borderline
ORGLA08G0024800.1 Steroid BR6OX2/CYP85A2 low borderline
ORGLA08G0024900.1 Steroid BR6OX2/CYP85A2 low borderline
ORGLA08G0069700.1 Steroid BR6OX2/CYP85A2 low borderline
ORGLA08G0153100.1 Steroid BR6OX2/CYP85A2 low borderline
ORGLA08G0174900.1 Steroid BR6OX2/CYP85A2 low borderline
ORGLA08G0175000.1 Steroid BR6OX2/CYP85A2 low borderline
ORGLA08G0175300.1 Steroid BR6OX2/CYP85A2 low borderline
ORGLA08G0218500.1 Steroid BR6OX2/CYP85A2 low borderline
ORGLA09G0023700.1 Steroid BR6OX2/CYP85A2 low borderline
ORGLA09G0027800.1 Steroid BR6OX2/CYP85A2 low borderline
ORGLA09G0088800.1 Steroid BR6OX2/CYP85A2 low borderline
ORGLA09G0089000.1 Steroid BR6OX2/CYP85A2 low borderline
ORGLA09G0089100.1 Steroid BR6OX2/CYP85A2 low borderline
ORGLA09G0089200.1 Steroid BR6OX2/CYP85A2 low borderline
ORGLA09G0091600.1 Steroid BR6OX2/CYP85A2 low borderline
ORGLA09G0135500.1 Steroid BR6OX2/CYP85A2 low borderline
ORGLA09G0170600.1 Steroid BR6OX2/CYP85A2 low borderline
ORGLA10G0027600.1 Steroid BR6OX2/CYP85A2 low borderline
ORGLA10G0031300.1 Steroid BR6OX2/CYP85A2 low borderline
ORGLA10G0040100.1 Steroid BR6OX2/CYP85A2 low borderline
ORGLA10G0079000.1 Steroid BR6OX2/CYP85A2 low borderline
ORGLA10G0099900.1 Steroid BR6OX2/CYP85A2 low borderline
ORGLA10G0100000.1 Steroid BR6OX2/CYP85A2 low borderline
ORGLA10G0100100.1 Steroid BR6OX2/CYP85A2 medium borderline
ORGLA11G0111200.1 Steroid BR6OX2/CYP85A2 low borderline
ORGLA11G0111900.1 Steroid BR6OX2/CYP85A2 low borderline
ORGLA11G0117100.1 Steroid BR6OX2/CYP85A2 medium borderline
ORGLA11G0211200.1 Steroid BR6OX2/CYP85A2 low borderline
ORGLA11G0223000.1 Steroid BR6OX2/CYP85A2 low borderline
ORGLA12G0019200.1 Steroid BR6OX2/CYP85A2 low borderline
ORGLA12G0109800.1 Steroid BR6OX2/CYP85A2 low borderline
ORGLA12G0175900.1 Steroid BR6OX2/CYP85A2 low borderline
ORGLA12G0182500.1 Steroid BR6OX2/CYP85A2 low borderline