PlantSME Plant secondary metabolism enzyme database

Oryza glaberrima (oryza_glaberrima)

Imported from atlas release summary for Oryza glaberrima.

1854
Candidate Protein Records
1650
Pathway-Level Records
3976
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 457 19 UGT (179) View species results
Alkaloid pathway 371 23 7DLGT (76) View species results
Phenylpropanoid pathway 341 13 POD (176) View species results
Flavonoid pathway 266 13 UFGT (169) View species results
Rosmarinic acid pathway 129 7 C4H (67) View species results
Steroid pathway 86 14 SMT1/SMT2/SMT3 (36) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1542 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 283 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Protein/Isoform Record Pathway Family Confidence Status
ORGLA07G0135800.1 Alkaloid T3O medium pass
ORGLA07G0208500.1 Alkaloid T3O medium pass
ORGLA07G0223900.1 Alkaloid T3O medium borderline
ORGLA07G0230100.1 Alkaloid T3O medium pass
ORGLA08G0057600.1 Alkaloid T3O medium borderline
ORGLA08G0069700.1 Alkaloid T3O medium pass
ORGLA08G0148800.1 Alkaloid T3O medium borderline
ORGLA08G0174900.1 Alkaloid T3O medium borderline
ORGLA08G0175000.1 Alkaloid T3O medium borderline
ORGLA08G0175300.1 Alkaloid T3O medium borderline
ORGLA08G0200200.1 Alkaloid T3O medium pass
ORGLA08G0217900.1 Alkaloid T3O medium borderline
ORGLA09G0023700.1 Alkaloid T3O medium borderline
ORGLA09G0027800.1 Alkaloid T3O medium borderline
ORGLA09G0088800.1 Alkaloid T3O medium borderline
ORGLA09G0089000.1 Alkaloid T3O medium borderline
ORGLA09G0089100.1 Alkaloid T3O medium borderline
ORGLA09G0089200.1 Alkaloid T3O medium borderline
ORGLA09G0091600.1 Alkaloid T3O medium borderline
ORGLA09G0135500.1 Alkaloid T3O medium borderline
ORGLA09G0135600.1 Alkaloid T3O medium borderline
ORGLA09G0168100.1 Alkaloid T3O medium borderline
ORGLA10G0027800.1 Alkaloid T3O medium borderline
ORGLA10G0028200.1 Alkaloid T3O medium borderline
ORGLA10G0031300.1 Alkaloid T3O medium borderline
ORGLA10G0040100.1 Alkaloid T3O medium borderline
ORGLA10G0079000.1 Alkaloid T3O medium borderline
ORGLA10G0099900.1 Alkaloid T3O medium borderline
ORGLA10G0100000.1 Alkaloid T3O medium borderline
ORGLA10G0100100.1 Alkaloid T3O medium borderline
ORGLA11G0024300.1 Alkaloid T3O medium pass
ORGLA11G0030700.1 Alkaloid T3O low borderline
ORGLA11G0111200.1 Alkaloid T3O medium borderline
ORGLA11G0111900.1 Alkaloid T3O medium borderline
ORGLA11G0169700.1 Alkaloid T3O medium borderline
ORGLA11G0199500.1 Alkaloid T3O medium pass
ORGLA11G0222700.1 Alkaloid T3O medium borderline
ORGLA11G0223000.1 Alkaloid T3O medium borderline
ORGLA12G0019200.1 Alkaloid T3O low borderline
ORGLA12G0022400.1 Alkaloid T3O medium pass
ORGLA12G0076100.1 Alkaloid T3O medium borderline
ORGLA12G0083800.1 Alkaloid T3O low borderline
ORGLA12G0109900.1 Alkaloid T3O low borderline
ORGLA12G0110000.1 Alkaloid T3O low borderline
ORGLA12G0110200.1 Alkaloid T3O low borderline
ORGLA12G0116700.1 Alkaloid T3O medium pass
ORGLA12G0119600.1 Alkaloid T3O medium borderline
ORGLA12G0175900.1 Alkaloid T3O medium borderline
ORGLA12G0182500.1 Alkaloid T3O medium pass