PlantSME Plant secondary metabolism enzyme database

Oryza granulata (oryza_granulata)

Imported from atlas release summary for Oryza granulata.

1789
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 564 19 BAHD (242) View species results
Alkaloid pathway 398 22 7DLGT (69) View species results
Phenylpropanoid pathway 308 13 POD (144) View species results
Flavonoid pathway 254 12 UFGT (158) View species results
Steroid pathway 150 12 SMT1/SMT2/SMT3 (58) View species results
Rosmarinic acid pathway 115 7 C4H (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1259 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 403 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BR6OX2/CYP85A2
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Gene Pathway Family Confidence Status
KAF0891255.1 Steroid BR6OX2/CYP85A2 low borderline
KAF0892056.1 Steroid BR6OX2/CYP85A2 low borderline
KAF0893283.1 Steroid BR6OX2/CYP85A2 low borderline
KAF0893317.1 Steroid BR6OX2/CYP85A2 low borderline
KAF0893551.1 Steroid BR6OX2/CYP85A2 low borderline
KAF0895164.1 Steroid BR6OX2/CYP85A2 low borderline
KAF0897138.1 Steroid BR6OX2/CYP85A2 low borderline
KAF0897568.1 Steroid BR6OX2/CYP85A2 low borderline
KAF0898310.1 Steroid BR6OX2/CYP85A2 low borderline
KAF0899600.1 Steroid BR6OX2/CYP85A2 low borderline
KAF0900548.1 Steroid BR6OX2/CYP85A2 medium borderline
KAF0901096.1 Steroid BR6OX2/CYP85A2 low borderline
KAF0901826.1 Steroid BR6OX2/CYP85A2 low borderline
KAF0902007.1 Steroid BR6OX2/CYP85A2 low borderline
KAF0902366.1 Steroid BR6OX2/CYP85A2 low borderline
KAF0904466.1 Steroid BR6OX2/CYP85A2 low borderline
KAF0904990.1 Steroid BR6OX2/CYP85A2 low borderline
KAF0907220.1 Steroid BR6OX2/CYP85A2 medium borderline
KAF0909277.1 Steroid BR6OX2/CYP85A2 low borderline
KAF0910630.1 Steroid BR6OX2/CYP85A2 low borderline
KAF0910631.1 Steroid BR6OX2/CYP85A2 low borderline
KAF0913115.1 Steroid BR6OX2/CYP85A2 low borderline
KAF0913116.1 Steroid BR6OX2/CYP85A2 low borderline
KAF0913117.1 Steroid BR6OX2/CYP85A2 low borderline
KAF0914196.1 Steroid BR6OX2/CYP85A2 low borderline
KAF0915233.1 Steroid BR6OX2/CYP85A2 low borderline
KAF0915741.1 Steroid BR6OX2/CYP85A2 low borderline
KAF0916061.1 Steroid BR6OX2/CYP85A2 low borderline
KAF0916789.1 Steroid BR6OX2/CYP85A2 low borderline
KAF0918498.1 Steroid BR6OX2/CYP85A2 low borderline
KAF0920112.1 Steroid BR6OX2/CYP85A2 low borderline
KAF0920187.1 Steroid BR6OX2/CYP85A2 low borderline
KAF0921277.1 Steroid BR6OX2/CYP85A2 low borderline
KAF0921563.1 Steroid BR6OX2/CYP85A2 low borderline
KAF0921564.1 Steroid BR6OX2/CYP85A2 low borderline
KAF0921755.1 Steroid BR6OX2/CYP85A2 low borderline
KAF0923396.1 Steroid BR6OX2/CYP85A2 low borderline
KAF0924372.1 Steroid BR6OX2/CYP85A2 low borderline
KAF0928795.1 Steroid BR6OX2/CYP85A2 low borderline
KAF0930214.1 Steroid BR6OX2/CYP85A2 low borderline
KAF0930371.1 Steroid BR6OX2/CYP85A2 low borderline
KAF0934171.1 Steroid BR6OX2/CYP85A2 low borderline