PlantSME Plant secondary metabolism enzyme database

Oryza granulata (oryza_granulata)

Imported from atlas release summary for Oryza granulata.

1789
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 564 19 BAHD (242) View species results
Alkaloid pathway 398 22 7DLGT (69) View species results
Phenylpropanoid pathway 308 13 POD (144) View species results
Flavonoid pathway 254 12 UFGT (158) View species results
Steroid pathway 150 12 SMT1/SMT2/SMT3 (58) View species results
Rosmarinic acid pathway 115 7 C4H (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1259 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 403 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TRI/TRII
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Gene Pathway Family Confidence Status
KAF0890085.1 Alkaloid TRI/TRII medium pass
KAF0890086.1 Alkaloid TRI/TRII medium pass
KAF0891507.1 Alkaloid TRI/TRII low borderline
KAF0891508.1 Alkaloid TRI/TRII low borderline
KAF0892680.1 Alkaloid TRI/TRII medium pass
KAF0892686.1 Alkaloid TRI/TRII medium pass
KAF0892688.1 Alkaloid TRI/TRII medium pass
KAF0894203.1 Alkaloid TRI/TRII medium pass
KAF0894213.1 Alkaloid TRI/TRII medium pass
KAF0894273.1 Alkaloid TRI/TRII medium pass
KAF0894300.1 Alkaloid TRI/TRII medium pass
KAF0894875.1 Alkaloid TRI/TRII low borderline
KAF0896162.1 Alkaloid TRI/TRII medium pass
KAF0896378.1 Alkaloid TRI/TRII medium pass
KAF0896846.1 Alkaloid TRI/TRII medium pass
KAF0901960.1 Alkaloid TRI/TRII medium pass
KAF0901963.1 Alkaloid TRI/TRII medium pass
KAF0902244.1 Alkaloid TRI/TRII medium pass
KAF0905613.1 Alkaloid TRI/TRII low borderline
KAF0907114.1 Alkaloid TRI/TRII medium pass
KAF0907405.1 Alkaloid TRI/TRII medium pass
KAF0907406.1 Alkaloid TRI/TRII medium pass
KAF0907758.1 Alkaloid TRI/TRII medium pass
KAF0907872.1 Alkaloid TRI/TRII low borderline
KAF0908583.1 Alkaloid TRI/TRII medium pass
KAF0910971.1 Alkaloid TRI/TRII medium pass
KAF0912340.1 Alkaloid TRI/TRII medium pass
KAF0915593.1 Alkaloid TRI/TRII low borderline
KAF0915726.1 Alkaloid TRI/TRII medium pass
KAF0917321.1 Alkaloid TRI/TRII low borderline
KAF0917322.1 Alkaloid TRI/TRII low borderline
KAF0923168.1 Alkaloid TRI/TRII medium pass
KAF0923757.1 Alkaloid TRI/TRII low borderline
KAF0923758.1 Alkaloid TRI/TRII low borderline
KAF0925442.1 Alkaloid TRI/TRII medium pass
KAF0925443.1 Alkaloid TRI/TRII medium pass
KAF0925444.1 Alkaloid TRI/TRII medium pass
KAF0931017.1 Alkaloid TRI/TRII medium pass
KAF0931019.1 Alkaloid TRI/TRII medium pass
KAF0933909.1 Alkaloid TRI/TRII medium pass
KAF0934310.1 Alkaloid TRI/TRII medium pass
KAF0935241.1 Alkaloid TRI/TRII low borderline