PlantSME Plant secondary metabolism enzyme database

Oryza granulata (oryza_granulata)

Imported from atlas release summary for Oryza granulata.

1789
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 564 19 BAHD (242) View species results
Alkaloid pathway 398 22 7DLGT (69) View species results
Phenylpropanoid pathway 308 13 POD (144) View species results
Flavonoid pathway 254 12 UFGT (158) View species results
Steroid pathway 150 12 SMT1/SMT2/SMT3 (58) View species results
Rosmarinic acid pathway 115 7 C4H (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1259 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 403 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
KAF0887501.1 Flavonoid F3H medium borderline
KAF0888582.1 Flavonoid F3H medium borderline
KAF0888653.1 Flavonoid F3H low borderline
KAF0890946.1 Flavonoid F3H medium borderline
KAF0890947.1 Flavonoid F3H medium borderline
KAF0890994.1 Flavonoid F3H medium pass
KAF0890996.1 Flavonoid F3H medium borderline
KAF0890997.1 Flavonoid F3H medium borderline
KAF0890998.1 Flavonoid F3H medium borderline
KAF0891157.1 Flavonoid F3H medium borderline
KAF0891158.1 Flavonoid F3H medium borderline
KAF0891423.1 Flavonoid F3H medium borderline
KAF0891424.1 Flavonoid F3H medium borderline
KAF0891425.1 Flavonoid F3H medium borderline
KAF0891426.1 Flavonoid F3H medium borderline
KAF0891930.1 Flavonoid F3H low borderline
KAF0891931.1 Flavonoid F3H low borderline
KAF0892385.1 Flavonoid F3H medium borderline
KAF0892386.1 Flavonoid F3H medium borderline
KAF0894329.1 Flavonoid F3H medium borderline
KAF0897330.1 Flavonoid F3H medium borderline
KAF0898418.1 Flavonoid F3H medium borderline
KAF0898419.1 Flavonoid F3H medium borderline
KAF0898740.1 Flavonoid F3H medium borderline
KAF0898741.1 Flavonoid F3H medium borderline
KAF0899393.1 Flavonoid F3H medium borderline
KAF0901549.1 Flavonoid F3H medium borderline
KAF0901669.1 Flavonoid F3H medium borderline
KAF0901672.1 Flavonoid F3H medium borderline
KAF0904810.1 Flavonoid F3H medium borderline
KAF0906371.1 Flavonoid F3H medium borderline
KAF0906813.1 Flavonoid F3H low borderline
KAF0907854.1 Flavonoid F3H low borderline
KAF0907877.1 Flavonoid F3H medium pass
KAF0907879.1 Flavonoid F3H medium borderline
KAF0907880.1 Flavonoid F3H medium borderline
KAF0911127.1 Flavonoid F3H medium borderline
KAF0911495.1 Flavonoid F3H medium borderline
KAF0912010.1 Flavonoid F3H medium borderline
KAF0913074.1 Flavonoid F3H low borderline
KAF0915106.1 Flavonoid F3H medium borderline
KAF0915200.1 Flavonoid F3H medium pass
KAF0915201.1 Flavonoid F3H medium borderline
KAF0915481.1 Flavonoid F3H low borderline
KAF0916025.1 Flavonoid F3H low borderline
KAF0916026.1 Flavonoid F3H low borderline
KAF0916129.1 Flavonoid F3H medium borderline
KAF0916130.1 Flavonoid F3H medium borderline
KAF0916301.1 Flavonoid F3H medium borderline
KAF0917679.1 Flavonoid F3H medium borderline