PlantSME Plant secondary metabolism enzyme database

Oryza granulata (oryza_granulata)

Imported from atlas release summary for Oryza granulata.

1789
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 564 19 BAHD (242) View species results
Alkaloid pathway 398 22 7DLGT (69) View species results
Phenylpropanoid pathway 308 13 POD (144) View species results
Flavonoid pathway 254 12 UFGT (158) View species results
Steroid pathway 150 12 SMT1/SMT2/SMT3 (58) View species results
Rosmarinic acid pathway 115 7 C4H (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1259 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 403 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
KAF0887777.1 Rosmarinic Acid 4CL medium pass
KAF0888462.1 Rosmarinic Acid 4CL medium pass
KAF0888463.1 Rosmarinic Acid 4CL medium pass
KAF0888464.1 Rosmarinic Acid 4CL medium pass
KAF0888465.1 Rosmarinic Acid 4CL medium pass
KAF0889943.1 Rosmarinic Acid 4CL low borderline
KAF0890531.1 Rosmarinic Acid 4CL medium pass
KAF0891085.1 Rosmarinic Acid 4CL medium pass
KAF0891955.1 Rosmarinic Acid 4CL low borderline
KAF0893263.1 Rosmarinic Acid 4CL medium pass
KAF0893274.1 Rosmarinic Acid 4CL medium pass
KAF0893276.1 Rosmarinic Acid 4CL medium pass
KAF0893277.1 Rosmarinic Acid 4CL low borderline
KAF0893279.1 Rosmarinic Acid 4CL medium pass
KAF0894197.1 Rosmarinic Acid 4CL low borderline
KAF0894198.1 Rosmarinic Acid 4CL low borderline
KAF0895118.1 Rosmarinic Acid 4CL medium pass
KAF0895734.1 Rosmarinic Acid 4CL low borderline
KAF0895735.1 Rosmarinic Acid 4CL low borderline
KAF0895825.1 Rosmarinic Acid 4CL low borderline
KAF0897303.1 Rosmarinic Acid 4CL medium pass
KAF0897593.1 Rosmarinic Acid 4CL medium pass
KAF0899811.1 Rosmarinic Acid 4CL medium pass
KAF0900340.1 Rosmarinic Acid 4CL medium pass
KAF0900499.1 Rosmarinic Acid 4CL low borderline
KAF0901009.1 Rosmarinic Acid 4CL medium pass
KAF0901519.1 Rosmarinic Acid 4CL low borderline
KAF0901520.1 Rosmarinic Acid 4CL low borderline
KAF0902637.1 Rosmarinic Acid 4CL medium pass
KAF0905798.1 Rosmarinic Acid 4CL medium pass
KAF0906125.1 Rosmarinic Acid 4CL medium pass
KAF0906727.1 Rosmarinic Acid 4CL low borderline
KAF0908462.1 Rosmarinic Acid 4CL medium pass
KAF0909301.1 Rosmarinic Acid 4CL medium pass
KAF0910100.1 Rosmarinic Acid 4CL medium pass
KAF0910495.1 Rosmarinic Acid 4CL low borderline
KAF0910496.1 Rosmarinic Acid 4CL low borderline
KAF0911054.1 Rosmarinic Acid 4CL medium pass
KAF0911615.1 Rosmarinic Acid 4CL low borderline
KAF0912510.1 Rosmarinic Acid 4CL low borderline
KAF0912511.1 Rosmarinic Acid 4CL low borderline
KAF0916871.1 Rosmarinic Acid 4CL low borderline
KAF0918814.1 Rosmarinic Acid 4CL low borderline
KAF0919545.1 Rosmarinic Acid 4CL low borderline
KAF0919745.1 Rosmarinic Acid 4CL medium pass
KAF0919746.1 Rosmarinic Acid 4CL medium pass
KAF0920093.1 Rosmarinic Acid 4CL low borderline
KAF0923116.1 Rosmarinic Acid 4CL low borderline
KAF0923117.1 Rosmarinic Acid 4CL low borderline
KAF0923558.1 Rosmarinic Acid 4CL low borderline