PlantSME Plant secondary metabolism enzyme database

Oryza granulata (oryza_granulata)

Imported from atlas release summary for Oryza granulata.

1789
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 564 19 BAHD (242) View species results
Alkaloid pathway 398 22 7DLGT (69) View species results
Phenylpropanoid pathway 308 13 POD (144) View species results
Flavonoid pathway 254 12 UFGT (158) View species results
Steroid pathway 150 12 SMT1/SMT2/SMT3 (58) View species results
Rosmarinic acid pathway 115 7 C4H (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1259 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 403 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
KAF0887994.1 Alkaloid T3O low borderline
KAF0888348.1 Alkaloid T3O low borderline
KAF0889123.1 Alkaloid T3O medium borderline
KAF0890119.1 Alkaloid T3O low borderline
KAF0890151.1 Alkaloid T3O medium pass
KAF0890152.1 Alkaloid T3O medium pass
KAF0891665.1 Alkaloid T3O medium borderline
KAF0892056.1 Alkaloid T3O medium borderline
KAF0893317.1 Alkaloid T3O medium pass
KAF0893331.1 Alkaloid T3O low borderline
KAF0893332.1 Alkaloid T3O low borderline
KAF0893333.1 Alkaloid T3O low borderline
KAF0893367.1 Alkaloid T3O medium pass
KAF0893369.1 Alkaloid T3O medium pass
KAF0893551.1 Alkaloid T3O medium borderline
KAF0897138.1 Alkaloid T3O medium borderline
KAF0897159.1 Alkaloid T3O low borderline
KAF0897204.1 Alkaloid T3O medium pass
KAF0898316.1 Alkaloid T3O medium borderline
KAF0899600.1 Alkaloid T3O medium borderline
KAF0901096.1 Alkaloid T3O medium borderline
KAF0904947.1 Alkaloid T3O medium borderline
KAF0904949.1 Alkaloid T3O medium borderline
KAF0904990.1 Alkaloid T3O medium borderline
KAF0904994.1 Alkaloid T3O medium borderline
KAF0905351.1 Alkaloid T3O medium pass
KAF0905353.1 Alkaloid T3O medium pass
KAF0905355.1 Alkaloid T3O medium pass
KAF0905957.1 Alkaloid T3O low borderline
KAF0905960.1 Alkaloid T3O medium pass
KAF0906031.1 Alkaloid T3O medium borderline
KAF0907220.1 Alkaloid T3O medium borderline
KAF0907550.1 Alkaloid T3O medium pass
KAF0909277.1 Alkaloid T3O medium borderline
KAF0909285.1 Alkaloid T3O medium borderline
KAF0910088.1 Alkaloid T3O low borderline
KAF0910630.1 Alkaloid T3O medium borderline
KAF0910631.1 Alkaloid T3O medium borderline
KAF0911633.1 Alkaloid T3O medium borderline
KAF0911709.1 Alkaloid T3O medium pass
KAF0911710.1 Alkaloid T3O medium pass
KAF0911711.1 Alkaloid T3O medium pass
KAF0912403.1 Alkaloid T3O medium pass
KAF0912528.1 Alkaloid T3O medium borderline
KAF0912529.1 Alkaloid T3O medium borderline
KAF0912530.1 Alkaloid T3O medium borderline
KAF0912531.1 Alkaloid T3O medium borderline
KAF0912532.1 Alkaloid T3O medium borderline
KAF0912870.1 Alkaloid T3O low borderline
KAF0912998.1 Alkaloid T3O low borderline