PlantSME Plant secondary metabolism enzyme database

Oryza granulata (oryza_granulata)

Imported from atlas release summary for Oryza granulata.

1789
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 564 19 BAHD (242) View species results
Alkaloid pathway 398 22 7DLGT (69) View species results
Phenylpropanoid pathway 308 13 POD (144) View species results
Flavonoid pathway 254 12 UFGT (158) View species results
Steroid pathway 150 12 SMT1/SMT2/SMT3 (58) View species results
Rosmarinic acid pathway 115 7 C4H (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1259 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 403 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CODM/T6ODM
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Gene Pathway Family Confidence Status
KAF0888582.1 Alkaloid CODM/T6ODM medium borderline
KAF0888653.1 Alkaloid CODM/T6ODM medium borderline
KAF0891423.1 Alkaloid CODM/T6ODM medium borderline
KAF0891424.1 Alkaloid CODM/T6ODM medium borderline
KAF0891425.1 Alkaloid CODM/T6ODM medium borderline
KAF0891426.1 Alkaloid CODM/T6ODM medium borderline
KAF0894329.1 Alkaloid CODM/T6ODM medium borderline
KAF0895545.1 Alkaloid CODM/T6ODM low borderline
KAF0895546.1 Alkaloid CODM/T6ODM low borderline
KAF0898418.1 Alkaloid CODM/T6ODM medium borderline
KAF0898419.1 Alkaloid CODM/T6ODM medium borderline
KAF0899393.1 Alkaloid CODM/T6ODM medium borderline
KAF0901549.1 Alkaloid CODM/T6ODM medium borderline
KAF0901672.1 Alkaloid CODM/T6ODM medium borderline
KAF0904810.1 Alkaloid CODM/T6ODM medium borderline
KAF0906371.1 Alkaloid CODM/T6ODM medium borderline
KAF0907877.1 Alkaloid CODM/T6ODM medium borderline
KAF0911127.1 Alkaloid CODM/T6ODM medium borderline
KAF0911495.1 Alkaloid CODM/T6ODM medium borderline
KAF0911496.1 Alkaloid CODM/T6ODM medium borderline
KAF0915106.1 Alkaloid CODM/T6ODM medium borderline
KAF0916129.1 Alkaloid CODM/T6ODM medium borderline
KAF0916130.1 Alkaloid CODM/T6ODM medium borderline
KAF0916301.1 Alkaloid CODM/T6ODM medium borderline
KAF0917934.1 Alkaloid CODM/T6ODM medium borderline
KAF0917974.1 Alkaloid CODM/T6ODM medium borderline
KAF0918038.1 Alkaloid CODM/T6ODM medium borderline
KAF0919930.1 Alkaloid CODM/T6ODM medium borderline
KAF0924659.1 Alkaloid CODM/T6ODM medium borderline
KAF0924857.1 Alkaloid CODM/T6ODM medium borderline
KAF0925939.1 Alkaloid CODM/T6ODM medium borderline
KAF0927514.1 Alkaloid CODM/T6ODM medium borderline
KAF0927753.1 Alkaloid CODM/T6ODM medium borderline
KAF0928300.1 Alkaloid CODM/T6ODM medium borderline
KAF0928709.1 Alkaloid CODM/T6ODM medium borderline
KAF0931294.1 Alkaloid CODM/T6ODM medium borderline
KAF0931772.1 Alkaloid CODM/T6ODM medium borderline
KAF0934762.1 Alkaloid CODM/T6ODM medium borderline
KAF0935478.1 Alkaloid CODM/T6ODM medium borderline