PlantSME Plant secondary metabolism enzyme database

Oryza granulata (oryza_granulata)

Imported from atlas release summary for Oryza granulata.

1789
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 564 19 BAHD (242) View species results
Alkaloid pathway 398 22 7DLGT (69) View species results
Phenylpropanoid pathway 308 13 POD (144) View species results
Flavonoid pathway 254 12 UFGT (158) View species results
Steroid pathway 150 12 SMT1/SMT2/SMT3 (58) View species results
Rosmarinic acid pathway 115 7 C4H (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1259 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 403 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
KAF0924372.1 Rosmarinic Acid C4H low borderline
KAF0924382.1 Rosmarinic Acid C4H low borderline
KAF0924631.1 Rosmarinic Acid C4H low borderline
KAF0924831.1 Rosmarinic Acid C4H low borderline
KAF0924833.1 Rosmarinic Acid C4H low borderline
KAF0925219.1 Rosmarinic Acid C4H low borderline
KAF0925358.1 Rosmarinic Acid C4H low borderline
KAF0926393.1 Rosmarinic Acid C4H low borderline
KAF0927061.1 Rosmarinic Acid C4H medium pass
KAF0927923.1 Rosmarinic Acid C4H low borderline
KAF0928084.1 Rosmarinic Acid C4H low borderline
KAF0928202.1 Rosmarinic Acid C4H low borderline
KAF0928717.1 Rosmarinic Acid C4H low borderline
KAF0928773.1 Rosmarinic Acid C4H low borderline
KAF0928774.1 Rosmarinic Acid C4H low borderline
KAF0928775.1 Rosmarinic Acid C4H low borderline
KAF0928776.1 Rosmarinic Acid C4H low borderline
KAF0928777.1 Rosmarinic Acid C4H low borderline
KAF0928787.1 Rosmarinic Acid C4H medium pass
KAF0928795.1 Rosmarinic Acid C4H low borderline
KAF0929272.1 Rosmarinic Acid C4H low borderline
KAF0929313.1 Rosmarinic Acid C4H low borderline
KAF0929988.1 Rosmarinic Acid C4H low borderline
KAF0930214.1 Rosmarinic Acid C4H low borderline
KAF0930371.1 Rosmarinic Acid C4H low borderline
KAF0930555.1 Rosmarinic Acid C4H low borderline
KAF0930583.1 Rosmarinic Acid C4H low borderline
KAF0933900.1 Rosmarinic Acid C4H low borderline
KAF0933901.1 Rosmarinic Acid C4H low borderline
KAF0933903.1 Rosmarinic Acid C4H low borderline
KAF0933905.1 Rosmarinic Acid C4H low borderline
KAF0933908.1 Rosmarinic Acid C4H low borderline
KAF0933913.1 Rosmarinic Acid C4H low borderline
KAF0934171.1 Rosmarinic Acid C4H low borderline
KAF0934876.1 Rosmarinic Acid C4H low borderline
KAF0935092.1 Rosmarinic Acid C4H low borderline
KAF0935098.1 Rosmarinic Acid C4H low borderline
KAF0935417.1 Rosmarinic Acid C4H low borderline
KAF0935573.1 Rosmarinic Acid C4H low borderline
KAF0936171.1 Rosmarinic Acid C4H medium pass
KAF0936182.1 Rosmarinic Acid C4H medium pass
KAF0936183.1 Rosmarinic Acid C4H low borderline
KAF0936184.1 Rosmarinic Acid C4H medium pass
KAF0936185.1 Rosmarinic Acid C4H medium pass