PlantSME Plant secondary metabolism enzyme database

Oryza granulata (oryza_granulata)

Imported from atlas release summary for Oryza granulata.

2184
Candidate Protein Records
1789
Pathway-Level Records
4061
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 564 19 BAHD (242) View species results
Alkaloid pathway 398 22 7DLGT (69) View species results
Phenylpropanoid pathway 308 13 POD (144) View species results
Flavonoid pathway 254 12 UFGT (158) View species results
Steroid pathway 150 12 SMT1/SMT2/SMT3 (58) View species results
Rosmarinic acid pathway 115 7 C4H (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1259 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 403 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
KAF0916772.1 Terpenoid FPPS medium pass
KAF0917817.1 Terpenoid FPPS medium pass
KAF0919867.1 Terpenoid FPPS medium pass
KAF0926519.1 Terpenoid FPPS medium pass
KAF0935461.1 Terpenoid FPPS low borderline
KAF0889115.1 Terpenoid GGPPS medium borderline
KAF0897801.1 Terpenoid GGPPS medium borderline
KAF0902299.1 Terpenoid GGPPS medium borderline
KAF0908405.1 Terpenoid GGPPS medium borderline
KAF0908406.1 Terpenoid GGPPS medium borderline
KAF0920812.1 Terpenoid GGPPS medium borderline
KAF0923580.1 Terpenoid GGPPS medium borderline
KAF0932308.1 Terpenoid GGPPS medium borderline
KAF0922639.1 Terpenoid GPPS low borderline
KAF0914347.1 Terpenoid HDR/IspH high pass
KAF0936135.1 Terpenoid HDS/IspG high pass
KAF0898042.1 Terpenoid HMGR medium pass
KAF0929233.1 Terpenoid HMGR medium pass
KAF0935124.1 Terpenoid HMGR medium pass
KAF0898290.1 Terpenoid HMGS high pass
KAF0898460.1 Terpenoid HMGS high pass
KAF0916207.1 Terpenoid HMGS high pass
KAF0931242.1 Terpenoid HMGS low borderline
KAF0905190.1 Terpenoid IDI medium pass
KAF0922736.1 Terpenoid IDI medium pass
KAF0922737.1 Terpenoid IDI medium pass
KAF0927456.1 Terpenoid IDI low borderline
KAF0894495.1 Terpenoid MCT/IspD low borderline
KAF0896872.1 Terpenoid MCT/IspD low borderline
KAF0917709.1 Terpenoid MCT/IspD medium pass
KAF0927156.1 Terpenoid MCT/IspD low borderline
KAF0933258.1 Terpenoid MDS/IspF high pass
KAF0933627.1 Terpenoid MDS/IspF low borderline
KAF0889488.1 Terpenoid MVD low borderline
KAF0895367.1 Terpenoid MVD medium pass
KAF0908091.1 Terpenoid MVD low borderline
KAF0893740.1 Terpenoid MVK low borderline
KAF0901443.1 Terpenoid MVK low borderline
KAF0912332.1 Terpenoid MVK low borderline
KAF0912333.1 Terpenoid MVK low borderline
KAF0919334.1 Terpenoid MVK medium pass
KAF0934528.1 Terpenoid MVK low borderline
KAF0902166.1 Terpenoid PMK low borderline
KAF0910589.1 Terpenoid PMK medium pass
KAF0887854.1 Terpenoid TPS medium pass
KAF0887855.1 Terpenoid TPS medium pass
KAF0887856.1 Terpenoid TPS medium pass
KAF0887857.1 Terpenoid TPS medium pass
KAF0893587.1 Terpenoid TPS medium pass
KAF0893588.1 Terpenoid TPS medium pass