PlantSME Plant secondary metabolism enzyme database

Oryza granulata (oryza_granulata)

Imported from atlas release summary for Oryza granulata.

2184
Candidate Protein Records
1789
Pathway-Level Records
4061
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 564 19 BAHD (242) View species results
Alkaloid pathway 398 22 7DLGT (69) View species results
Phenylpropanoid pathway 308 13 POD (144) View species results
Flavonoid pathway 254 12 UFGT (158) View species results
Steroid pathway 150 12 SMT1/SMT2/SMT3 (58) View species results
Rosmarinic acid pathway 115 7 C4H (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1259 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 403 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
KAF0930583.1 Alkaloid IO medium borderline
KAF0936171.1 Alkaloid IO medium borderline
KAF0897002.1 Alkaloid ISY medium pass
KAF0911970.1 Alkaloid ISY medium pass
KAF0922351.1 Alkaloid ISY medium pass
KAF0929018.1 Alkaloid ISY low borderline
KAF0890980.1 Alkaloid LAMT medium borderline
KAF0890988.1 Alkaloid LAMT medium borderline
KAF0896121.1 Alkaloid LAMT medium borderline
KAF0903221.1 Alkaloid LAMT medium borderline
KAF0903222.1 Alkaloid LAMT medium borderline
KAF0935642.1 Alkaloid LAMT medium borderline
KAF0935643.1 Alkaloid LAMT medium borderline
KAF0893926.1 Alkaloid MPO medium pass
KAF0905921.1 Alkaloid MPO high pass
KAF0913071.1 Alkaloid MPO high pass
KAF0925533.1 Alkaloid MPO low borderline
KAF0929905.1 Alkaloid MPO low borderline
KAF0931057.1 Alkaloid MPO low borderline
KAF0935821.1 Alkaloid MPO medium pass
KAF0935822.1 Alkaloid MPO low borderline
KAF0887501.1 Alkaloid NCS medium borderline
KAF0890772.1 Alkaloid NCS medium borderline
KAF0891157.1 Alkaloid NCS medium borderline
KAF0891158.1 Alkaloid NCS medium borderline
KAF0892227.1 Alkaloid NCS medium pass
KAF0892228.1 Alkaloid NCS medium pass
KAF0894600.1 Alkaloid NCS medium borderline
KAF0898740.1 Alkaloid NCS medium borderline
KAF0901669.1 Alkaloid NCS medium borderline
KAF0910356.1 Alkaloid NCS medium borderline
KAF0912009.1 Alkaloid NCS medium borderline
KAF0912010.1 Alkaloid NCS medium borderline
KAF0912011.1 Alkaloid NCS medium borderline
KAF0915200.1 Alkaloid NCS medium borderline
KAF0916025.1 Alkaloid NCS medium borderline
KAF0916026.1 Alkaloid NCS medium borderline
KAF0921860.1 Alkaloid NCS medium borderline
KAF0921863.1 Alkaloid NCS medium borderline
KAF0928703.1 Alkaloid NCS medium borderline
KAF0928706.1 Alkaloid NCS medium borderline
KAF0928707.1 Alkaloid NCS medium borderline
KAF0928708.1 Alkaloid NCS medium borderline
KAF0930265.1 Alkaloid NCS low borderline
KAF0930266.1 Alkaloid NCS medium borderline
KAF0889037.1 Alkaloid NMT medium pass
KAF0889411.1 Alkaloid NMT low borderline
KAF0889545.1 Alkaloid NMT low borderline
KAF0889706.1 Alkaloid NMT medium borderline
KAF0890612.1 Alkaloid NMT low borderline