PlantSME Plant secondary metabolism enzyme database

Oryza granulata (oryza_granulata)

Imported from atlas release summary for Oryza granulata.

2184
Candidate Protein Records
1789
Pathway-Level Records
4061
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 564 19 BAHD (242) View species results
Alkaloid pathway 398 22 7DLGT (69) View species results
Phenylpropanoid pathway 308 13 POD (144) View species results
Flavonoid pathway 254 12 UFGT (158) View species results
Steroid pathway 150 12 SMT1/SMT2/SMT3 (58) View species results
Rosmarinic acid pathway 115 7 C4H (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1259 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 403 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
KAF0919677.1 Alkaloid T3O medium pass
KAF0919882.1 Alkaloid T3O low borderline
KAF0920112.1 Alkaloid T3O medium pass
KAF0921563.1 Alkaloid T3O low borderline
KAF0921564.1 Alkaloid T3O low borderline
KAF0921602.1 Alkaloid T3O medium pass
KAF0921753.1 Alkaloid T3O medium pass
KAF0922813.1 Alkaloid T3O medium pass
KAF0923396.1 Alkaloid T3O medium borderline
KAF0924208.1 Alkaloid T3O medium pass
KAF0924382.1 Alkaloid T3O medium borderline
KAF0924633.1 Alkaloid T3O medium pass
KAF0924831.1 Alkaloid T3O low borderline
KAF0924833.1 Alkaloid T3O low borderline
KAF0926757.1 Alkaloid T3O low borderline
KAF0926758.1 Alkaloid T3O low borderline
KAF0927481.1 Alkaloid T3O low borderline
KAF0927918.1 Alkaloid T3O medium pass
KAF0927923.1 Alkaloid T3O medium pass
KAF0928787.1 Alkaloid T3O medium borderline
KAF0929419.1 Alkaloid T3O medium pass
KAF0930214.1 Alkaloid T3O low borderline
KAF0930371.1 Alkaloid T3O medium borderline
KAF0930555.1 Alkaloid T3O medium borderline
KAF0933295.1 Alkaloid T3O low borderline
KAF0933901.1 Alkaloid T3O medium borderline
KAF0934420.1 Alkaloid T3O low borderline
KAF0934876.1 Alkaloid T3O medium pass
KAF0935417.1 Alkaloid T3O medium pass
KAF0934070.1 Alkaloid TDC low borderline
KAF0890085.1 Alkaloid TRI/TRII medium pass
KAF0890086.1 Alkaloid TRI/TRII medium pass
KAF0891507.1 Alkaloid TRI/TRII low borderline
KAF0891508.1 Alkaloid TRI/TRII low borderline
KAF0892680.1 Alkaloid TRI/TRII medium pass
KAF0892686.1 Alkaloid TRI/TRII medium pass
KAF0892688.1 Alkaloid TRI/TRII medium pass
KAF0894203.1 Alkaloid TRI/TRII medium pass
KAF0894213.1 Alkaloid TRI/TRII medium pass
KAF0894273.1 Alkaloid TRI/TRII medium pass
KAF0894300.1 Alkaloid TRI/TRII medium pass
KAF0894875.1 Alkaloid TRI/TRII low borderline
KAF0896162.1 Alkaloid TRI/TRII medium pass
KAF0896378.1 Alkaloid TRI/TRII medium pass
KAF0896846.1 Alkaloid TRI/TRII medium pass
KAF0901960.1 Alkaloid TRI/TRII medium pass
KAF0901963.1 Alkaloid TRI/TRII medium pass
KAF0902244.1 Alkaloid TRI/TRII medium pass
KAF0905613.1 Alkaloid TRI/TRII low borderline
KAF0907114.1 Alkaloid TRI/TRII medium pass