PlantSME Plant secondary metabolism enzyme database

Oryza granulata (oryza_granulata)

Imported from atlas release summary for Oryza granulata.

2184
Candidate Protein Records
1789
Pathway-Level Records
4061
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 564 19 BAHD (242) View species results
Alkaloid pathway 398 22 7DLGT (69) View species results
Phenylpropanoid pathway 308 13 POD (144) View species results
Flavonoid pathway 254 12 UFGT (158) View species results
Steroid pathway 150 12 SMT1/SMT2/SMT3 (58) View species results
Rosmarinic acid pathway 115 7 C4H (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1259 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 403 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
KAF0935092.1 Rosmarinic Acid C4H low borderline
KAF0935098.1 Rosmarinic Acid C4H low borderline
KAF0935417.1 Rosmarinic Acid C4H low borderline
KAF0935573.1 Rosmarinic Acid C4H low borderline
KAF0936171.1 Rosmarinic Acid C4H medium pass
KAF0936182.1 Rosmarinic Acid C4H medium pass
KAF0936183.1 Rosmarinic Acid C4H low borderline
KAF0936184.1 Rosmarinic Acid C4H medium pass
KAF0936185.1 Rosmarinic Acid C4H medium pass
KAF0890698.1 Rosmarinic Acid CPR medium pass
KAF0900124.1 Rosmarinic Acid CPR medium pass
KAF0900125.1 Rosmarinic Acid CPR medium pass
KAF0905775.1 Rosmarinic Acid CPR medium pass
KAF0909709.1 Rosmarinic Acid CPR low borderline
KAF0911303.1 Rosmarinic Acid CPR low borderline
KAF0912062.1 Rosmarinic Acid CPR low borderline
KAF0919055.1 Rosmarinic Acid CPR low borderline
KAF0919056.1 Rosmarinic Acid CPR low borderline
KAF0919057.1 Rosmarinic Acid CPR low borderline
KAF0919058.1 Rosmarinic Acid CPR low borderline
KAF0925773.1 Rosmarinic Acid CPR medium pass
KAF0893228.1 Rosmarinic Acid HPPR medium pass
KAF0893229.1 Rosmarinic Acid HPPR medium pass
KAF0893230.1 Rosmarinic Acid HPPR medium pass
KAF0893231.1 Rosmarinic Acid HPPR medium pass
KAF0893232.1 Rosmarinic Acid HPPR medium pass
KAF0893236.1 Rosmarinic Acid HPPR medium pass
KAF0908807.1 Rosmarinic Acid HPPR low borderline
KAF0911378.1 Rosmarinic Acid HPPR medium pass
KAF0917336.1 Rosmarinic Acid HPPR medium pass
KAF0935172.1 Rosmarinic Acid HPPR low borderline
KAF0890919.1 Rosmarinic Acid PAL high pass
KAF0890920.1 Rosmarinic Acid PAL high pass
KAF0925687.1 Rosmarinic Acid PAL low borderline
KAF0926960.1 Rosmarinic Acid PAL high pass
KAF0931522.1 Rosmarinic Acid PAL high pass
KAF0931523.1 Rosmarinic Acid PAL high pass
KAF0931802.1 Rosmarinic Acid PAL high pass
KAF0931803.1 Rosmarinic Acid PAL high pass
KAF0931804.1 Rosmarinic Acid PAL high pass
KAF0891393.1 Rosmarinic Acid RAS low borderline
KAF0891835.1 Rosmarinic Acid RAS medium pass
KAF0891836.1 Rosmarinic Acid RAS medium pass
KAF0892834.1 Rosmarinic Acid RAS medium pass
KAF0893337.1 Rosmarinic Acid RAS low borderline
KAF0893338.1 Rosmarinic Acid RAS low borderline
KAF0895082.1 Rosmarinic Acid RAS medium pass
KAF0896832.1 Rosmarinic Acid RAS low borderline
KAF0898638.1 Rosmarinic Acid RAS low borderline
KAF0898639.1 Rosmarinic Acid RAS low borderline