PlantSME Plant secondary metabolism enzyme database

Oryza granulata (oryza_granulata)

Imported from atlas release summary for Oryza granulata.

2184
Candidate Protein Records
1789
Pathway-Level Records
4061
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 564 19 BAHD (242) View species results
Alkaloid pathway 398 22 7DLGT (69) View species results
Phenylpropanoid pathway 308 13 POD (144) View species results
Flavonoid pathway 254 12 UFGT (158) View species results
Steroid pathway 150 12 SMT1/SMT2/SMT3 (58) View species results
Rosmarinic acid pathway 115 7 C4H (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1259 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 403 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
KAF0920811.1 Flavonoid F3H medium borderline
KAF0921860.1 Flavonoid F3H low borderline
KAF0921863.1 Flavonoid F3H low borderline
KAF0921971.1 Flavonoid F3H medium borderline
KAF0922656.1 Flavonoid F3H medium borderline
KAF0923072.1 Flavonoid F3H medium borderline
KAF0924659.1 Flavonoid F3H medium pass
KAF0924857.1 Flavonoid F3H medium borderline
KAF0924858.1 Flavonoid F3H low borderline
KAF0925222.1 Flavonoid F3H low borderline
KAF0925668.1 Flavonoid F3H medium borderline
KAF0925670.1 Flavonoid F3H medium borderline
KAF0925939.1 Flavonoid F3H medium borderline
KAF0927514.1 Flavonoid F3H medium pass
KAF0927752.1 Flavonoid F3H medium borderline
KAF0927753.1 Flavonoid F3H medium borderline
KAF0928300.1 Flavonoid F3H medium borderline
KAF0928703.1 Flavonoid F3H medium borderline
KAF0928704.1 Flavonoid F3H medium borderline
KAF0928706.1 Flavonoid F3H medium borderline
KAF0928707.1 Flavonoid F3H medium borderline
KAF0928708.1 Flavonoid F3H low borderline
KAF0928709.1 Flavonoid F3H medium borderline
KAF0928710.1 Flavonoid F3H medium borderline
KAF0929984.1 Flavonoid F3H medium borderline
KAF0930265.1 Flavonoid F3H low borderline
KAF0931264.1 Flavonoid F3H medium borderline
KAF0931294.1 Flavonoid F3H medium borderline
KAF0931477.1 Flavonoid F3H medium pass
KAF0931478.1 Flavonoid F3H medium pass
KAF0934762.1 Flavonoid F3H medium borderline
KAF0935478.1 Flavonoid F3H medium borderline
KAF0890772.1 Flavonoid FLS medium borderline
KAF0904167.1 Flavonoid FLS low borderline
KAF0905494.1 Flavonoid FLS low borderline
KAF0919644.1 Flavonoid FLS medium borderline
KAF0896349.1 Flavonoid FNS medium borderline
KAF0899601.1 Flavonoid FNS medium borderline
KAF0900387.1 Flavonoid FNS medium borderline
KAF0901826.1 Flavonoid FNS medium borderline
KAF0904466.1 Flavonoid FNS medium borderline
KAF0905960.1 Flavonoid FNS medium borderline
KAF0909120.1 Flavonoid FNS medium borderline
KAF0909121.1 Flavonoid FNS medium borderline
KAF0912403.1 Flavonoid FNS medium borderline
KAF0913234.1 Flavonoid FNS low borderline
KAF0915072.1 Flavonoid FNS medium borderline
KAF0915073.1 Flavonoid FNS medium borderline
KAF0915074.1 Flavonoid FNS medium borderline
KAF0915075.1 Flavonoid FNS medium borderline