PlantSME Plant secondary metabolism enzyme database

Oryza granulata (oryza_granulata)

Imported from atlas release summary for Oryza granulata.

2184
Candidate Protein Records
1789
Pathway-Level Records
4061
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 564 19 BAHD (242) View species results
Alkaloid pathway 398 22 7DLGT (69) View species results
Phenylpropanoid pathway 308 13 POD (144) View species results
Flavonoid pathway 254 12 UFGT (158) View species results
Steroid pathway 150 12 SMT1/SMT2/SMT3 (58) View species results
Rosmarinic acid pathway 115 7 C4H (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1259 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 403 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
KAF0924089.1 Phenylpropanoid CAD low borderline
KAF0924515.1 Phenylpropanoid CAD low borderline
KAF0924561.1 Phenylpropanoid CAD medium pass
KAF0925648.1 Phenylpropanoid CAD low borderline
KAF0929231.1 Phenylpropanoid CAD low borderline
KAF0930093.1 Phenylpropanoid CAD medium pass
KAF0930094.1 Phenylpropanoid CAD medium pass
KAF0930396.1 Phenylpropanoid CAD low borderline
KAF0930397.1 Phenylpropanoid CAD low borderline
KAF0930398.1 Phenylpropanoid CAD low borderline
KAF0930399.1 Phenylpropanoid CAD low borderline
KAF0930400.1 Phenylpropanoid CAD low borderline
KAF0930401.1 Phenylpropanoid CAD low borderline
KAF0930402.1 Phenylpropanoid CAD low borderline
KAF0930403.1 Phenylpropanoid CAD low borderline
KAF0935060.1 Phenylpropanoid CAD medium pass
KAF0935077.1 Phenylpropanoid CAD low borderline
KAF0935536.1 Phenylpropanoid CAD medium pass
KAF0887885.1 Phenylpropanoid CCR low borderline
KAF0890807.1 Phenylpropanoid CCR medium pass
KAF0897734.1 Phenylpropanoid CCR medium borderline
KAF0900221.1 Phenylpropanoid CCR medium borderline
KAF0900222.1 Phenylpropanoid CCR medium borderline
KAF0901125.1 Phenylpropanoid CCR medium borderline
KAF0901949.1 Phenylpropanoid CCR medium borderline
KAF0902818.1 Phenylpropanoid CCR low borderline
KAF0906066.1 Phenylpropanoid CCR medium borderline
KAF0906067.1 Phenylpropanoid CCR medium borderline
KAF0906707.1 Phenylpropanoid CCR medium pass
KAF0906747.1 Phenylpropanoid CCR medium borderline
KAF0907193.1 Phenylpropanoid CCR medium pass
KAF0907195.1 Phenylpropanoid CCR medium pass
KAF0909853.1 Phenylpropanoid CCR medium pass
KAF0911433.1 Phenylpropanoid CCR medium borderline
KAF0911434.1 Phenylpropanoid CCR medium borderline
KAF0915032.1 Phenylpropanoid CCR medium borderline
KAF0918406.1 Phenylpropanoid CCR medium pass
KAF0920525.1 Phenylpropanoid CCR medium borderline
KAF0920526.1 Phenylpropanoid CCR medium pass
KAF0921463.1 Phenylpropanoid CCR low borderline
KAF0923553.1 Phenylpropanoid CCR medium pass
KAF0923627.1 Phenylpropanoid CCR medium borderline
KAF0929229.1 Phenylpropanoid CCR medium borderline
KAF0929230.1 Phenylpropanoid CCR low borderline
KAF0929232.1 Phenylpropanoid CCR medium borderline
KAF0929439.1 Phenylpropanoid CCR medium borderline
KAF0930827.1 Phenylpropanoid CCR medium borderline
KAF0931252.1 Phenylpropanoid CCR low borderline
KAF0931440.1 Phenylpropanoid CCR medium borderline
KAF0931443.1 Phenylpropanoid CCR medium borderline