PlantSME Plant secondary metabolism enzyme database

Oryza granulata (oryza_granulata)

Imported from atlas release summary for Oryza granulata.

2184
Candidate Protein Records
1789
Pathway-Level Records
4061
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 564 19 BAHD (242) View species results
Alkaloid pathway 398 22 7DLGT (69) View species results
Phenylpropanoid pathway 308 13 POD (144) View species results
Flavonoid pathway 254 12 UFGT (158) View species results
Steroid pathway 150 12 SMT1/SMT2/SMT3 (58) View species results
Rosmarinic acid pathway 115 7 C4H (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1259 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 403 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
KAF0890528.1 Phenylpropanoid CSE medium pass
KAF0890724.1 Phenylpropanoid CSE medium pass
KAF0891036.1 Phenylpropanoid CSE low borderline
KAF0895301.1 Phenylpropanoid CSE medium pass
KAF0898473.1 Phenylpropanoid CSE medium pass
KAF0901752.1 Phenylpropanoid CSE medium pass
KAF0905971.1 Phenylpropanoid CSE medium pass
KAF0906619.1 Phenylpropanoid CSE low borderline
KAF0906688.1 Phenylpropanoid CSE medium pass
KAF0915239.1 Phenylpropanoid CSE medium pass
KAF0915629.1 Phenylpropanoid CSE medium pass
KAF0920882.1 Phenylpropanoid CSE medium pass
KAF0925293.1 Phenylpropanoid CSE medium pass
KAF0927672.1 Phenylpropanoid CSE medium pass
KAF0927919.1 Phenylpropanoid CSE medium pass
KAF0933320.1 Phenylpropanoid CSE medium pass
KAF0935109.1 Phenylpropanoid CSE medium pass
KAF0935141.1 Phenylpropanoid CSE medium pass
KAF0936111.1 Phenylpropanoid CSE medium pass
KAF0893740.1 Phenylpropanoid F5H/CYP84A medium pass
KAF0896127.1 Phenylpropanoid F5H/CYP84A low borderline
KAF0896349.1 Phenylpropanoid F5H/CYP84A medium borderline
KAF0897568.1 Phenylpropanoid F5H/CYP84A medium borderline
KAF0909279.1 Phenylpropanoid F5H/CYP84A medium borderline
KAF0915234.1 Phenylpropanoid F5H/CYP84A medium borderline
KAF0916794.1 Phenylpropanoid F5H/CYP84A medium borderline
KAF0917328.1 Phenylpropanoid F5H/CYP84A medium borderline
KAF0921755.1 Phenylpropanoid F5H/CYP84A medium borderline
KAF0922719.1 Phenylpropanoid F5H/CYP84A medium borderline
KAF0922720.1 Phenylpropanoid F5H/CYP84A medium borderline
KAF0933901.1 Phenylpropanoid F5H/CYP84A medium borderline
KAF0889508.1 Phenylpropanoid HCT medium pass
KAF0889985.1 Phenylpropanoid HCT low borderline
KAF0891835.1 Phenylpropanoid HCT medium pass
KAF0891836.1 Phenylpropanoid HCT medium pass
KAF0892834.1 Phenylpropanoid HCT low borderline
KAF0893337.1 Phenylpropanoid HCT low borderline
KAF0895082.1 Phenylpropanoid HCT medium pass
KAF0898638.1 Phenylpropanoid HCT low borderline
KAF0898639.1 Phenylpropanoid HCT low borderline
KAF0898924.1 Phenylpropanoid HCT medium pass
KAF0901962.1 Phenylpropanoid HCT medium pass
KAF0901966.1 Phenylpropanoid HCT medium pass
KAF0901967.1 Phenylpropanoid HCT medium pass
KAF0903711.1 Phenylpropanoid HCT medium pass
KAF0911406.1 Phenylpropanoid HCT medium pass
KAF0911883.1 Phenylpropanoid HCT low borderline
KAF0911884.1 Phenylpropanoid HCT low borderline
KAF0916043.1 Phenylpropanoid HCT low borderline
KAF0916480.1 Phenylpropanoid HCT medium pass