PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

6488
Candidate Protein Records
5617
Pathway-Level Records
12778
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Pvir04NG0001700.2 Alkaloid CODM/T6ODM medium borderline
Pvir04NG0001700.3 Alkaloid CODM/T6ODM medium borderline
Pvir04NG0004840.1 Alkaloid CODM/T6ODM medium borderline
Pvir04NG0005700.1 Alkaloid CODM/T6ODM low borderline
Pvir04NG0005730.1 Alkaloid CODM/T6ODM medium borderline
Pvir04NG0005750.1 Alkaloid CODM/T6ODM medium borderline
Pvir04NG0008200.2 Alkaloid CODM/T6ODM medium borderline
Pvir04NG0019920.1 Alkaloid CODM/T6ODM medium borderline
Pvir05KG0002470.1 Alkaloid CODM/T6ODM medium borderline
Pvir05KG0004300.1 Alkaloid CODM/T6ODM medium borderline
Pvir05KG0004930.1 Alkaloid CODM/T6ODM medium borderline
Pvir05KG0017800.1 Alkaloid CODM/T6ODM medium borderline
Pvir05KG0022400.1 Alkaloid CODM/T6ODM medium borderline
Pvir05KG0025440.1 Alkaloid CODM/T6ODM medium borderline
Pvir05KG0038590.1 Alkaloid CODM/T6ODM medium borderline
Pvir05KG0044140.1 Alkaloid CODM/T6ODM medium borderline
Pvir05NG0002510.1 Alkaloid CODM/T6ODM medium borderline
Pvir05NG0004290.1 Alkaloid CODM/T6ODM medium borderline
Pvir05NG0005120.1 Alkaloid CODM/T6ODM medium borderline
Pvir05NG0005120.2 Alkaloid CODM/T6ODM medium borderline
Pvir05NG0017160.1 Alkaloid CODM/T6ODM medium borderline
Pvir05NG0021030.1 Alkaloid CODM/T6ODM medium borderline
Pvir05NG0021770.1 Alkaloid CODM/T6ODM medium borderline
Pvir05NG0024060.1 Alkaloid CODM/T6ODM medium borderline
Pvir05NG0043340.1 Alkaloid CODM/T6ODM medium borderline
Pvir05NG0051430.2 Alkaloid CODM/T6ODM medium borderline
Pvir06KG0025900.1 Alkaloid CODM/T6ODM low borderline
Pvir06NG0008960.5 Alkaloid CODM/T6ODM medium borderline
Pvir06NG0024880.2 Alkaloid CODM/T6ODM low borderline
Pvir07KG0003280.1 Alkaloid CODM/T6ODM medium borderline
Pvir07KG0023260.1 Alkaloid CODM/T6ODM medium borderline
Pvir07KG0027730.1 Alkaloid CODM/T6ODM medium borderline
Pvir07KG0034680.1 Alkaloid CODM/T6ODM medium borderline
Pvir07KG0035050.1 Alkaloid CODM/T6ODM medium borderline
Pvir07KG0035050.2 Alkaloid CODM/T6ODM medium borderline
Pvir07KG0035050.3 Alkaloid CODM/T6ODM medium borderline
Pvir07KG0035080.1 Alkaloid CODM/T6ODM medium borderline
Pvir07NG0005760.1 Alkaloid CODM/T6ODM medium borderline
Pvir07NG0021530.1 Alkaloid CODM/T6ODM medium borderline
Pvir07NG0026190.1 Alkaloid CODM/T6ODM medium borderline
Pvir07NG0031470.2 Alkaloid CODM/T6ODM medium borderline
Pvir07NG0033400.1 Alkaloid CODM/T6ODM medium borderline
Pvir07NG0033400.2 Alkaloid CODM/T6ODM medium borderline
Pvir08KG0012490.1 Alkaloid CODM/T6ODM medium borderline
Pvir08NG0011640.1 Alkaloid CODM/T6ODM medium borderline
Pvir09KG0000250.1 Alkaloid CODM/T6ODM medium borderline
Pvir09KG0017390.1 Alkaloid CODM/T6ODM medium borderline
Pvir09KG0017390.2 Alkaloid CODM/T6ODM medium borderline
Pvir09KG0017400.1 Alkaloid CODM/T6ODM medium borderline
Pvir09KG0032780.1 Alkaloid CODM/T6ODM medium borderline