PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

6488
Candidate Protein Records
5617
Pathway-Level Records
12778
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Pvir08KG0022220.1 Rosmarinic Acid TAT medium pass
Pvir08KG0030730.1 Rosmarinic Acid TAT medium pass
Pvir08NG0018160.1 Rosmarinic Acid TAT medium pass
Pvir08NG0018310.1 Rosmarinic Acid TAT medium pass
Pvir08NG0023950.1 Rosmarinic Acid TAT medium pass
Pvir08NG0023950.2 Rosmarinic Acid TAT medium pass
Pvir09KG0034000.1 Rosmarinic Acid TAT medium pass
Pvir09KG0034010.1 Rosmarinic Acid TAT medium pass
Pvir09NG0033090.1 Rosmarinic Acid TAT medium pass
Pvir09NG0033090.2 Rosmarinic Acid TAT medium pass
Pvir09NG0043150.1 Rosmarinic Acid TAT medium pass
Pvir01KG0024560.1 Steroid BR6OX1/CYP85A1 medium borderline
Pvir01KG0025050.1 Steroid BR6OX1/CYP85A1 medium borderline
Pvir01KG0025050.2 Steroid BR6OX1/CYP85A1 medium borderline
Pvir01KG0025060.1 Steroid BR6OX1/CYP85A1 medium borderline
Pvir01KG0035330.1 Steroid BR6OX1/CYP85A1 medium borderline
Pvir01NG0023970.1 Steroid BR6OX1/CYP85A1 medium borderline
Pvir01NG0024400.1 Steroid BR6OX1/CYP85A1 medium borderline
Pvir01NG0024470.1 Steroid BR6OX1/CYP85A1 medium borderline
Pvir01NG0025460.1 Steroid BR6OX1/CYP85A1 medium borderline
Pvir01NG0034070.1 Steroid BR6OX1/CYP85A1 medium borderline
Pvir01NG0034070.2 Steroid BR6OX1/CYP85A1 medium borderline
Pvir01NG0034070.3 Steroid BR6OX1/CYP85A1 medium borderline
Pvir01NG0034070.4 Steroid BR6OX1/CYP85A1 medium borderline
Pvir01NG0034070.5 Steroid BR6OX1/CYP85A1 medium borderline
Pvir02KG0044580.1 Steroid BR6OX1/CYP85A1 medium borderline
Pvir02NG0026340.1 Steroid BR6OX1/CYP85A1 low borderline
Pvir02NG0026380.1 Steroid BR6OX1/CYP85A1 medium borderline
Pvir02NG0028970.1 Steroid BR6OX1/CYP85A1 low borderline
Pvir02NG0041220.1 Steroid BR6OX1/CYP85A1 medium borderline
Pvir04NG0019720.1 Steroid BR6OX1/CYP85A1 low borderline
Pvir04NG0019720.2 Steroid BR6OX1/CYP85A1 low borderline
Pvir05KG0025040.1 Steroid BR6OX1/CYP85A1 low borderline
Pvir05NG0012910.1 Steroid BR6OX1/CYP85A1 medium borderline
Pvir05NG0033240.1 Steroid BR6OX1/CYP85A1 medium borderline
Pvir05NG0033240.2 Steroid BR6OX1/CYP85A1 medium borderline
Pvir06KG0001770.1 Steroid BR6OX1/CYP85A1 medium borderline
Pvir06KG0001770.2 Steroid BR6OX1/CYP85A1 medium borderline
Pvir06KG0031870.1 Steroid BR6OX1/CYP85A1 low borderline
Pvir06NG0001980.1 Steroid BR6OX1/CYP85A1 medium borderline
Pvir07KG0006440.1 Steroid BR6OX1/CYP85A1 medium borderline
Pvir08NG0006180.1 Steroid BR6OX1/CYP85A1 medium borderline
Pvir09KG0020210.1 Steroid BR6OX1/CYP85A1 medium borderline
Pvir09KG0020220.1 Steroid BR6OX1/CYP85A1 medium borderline
Pvir09KG0020230.1 Steroid BR6OX1/CYP85A1 medium borderline
Pvir09KG0025560.1 Steroid BR6OX1/CYP85A1 medium borderline
Pvir09KG0031810.1 Steroid BR6OX1/CYP85A1 medium borderline
Pvir09KG0031820.1 Steroid BR6OX1/CYP85A1 medium borderline
Pvir09KG0031820.2 Steroid BR6OX1/CYP85A1 medium borderline
Pvir09KG0039860.8 Steroid BR6OX1/CYP85A1 medium borderline