PlantSME Plant secondary metabolism enzyme database

Phaseolus vulgaris (phaseolus_vulgaris)

Imported from atlas release summary for Phaseolus vulgaris.

2008
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 572 20 BAHD (235) View species results
Alkaloid pathway 473 20 7DLGT (83) View species results
Phenylpropanoid pathway 419 11 POD (185) View species results
Flavonoid pathway 279 10 UFGT (189) View species results
Rosmarinic acid pathway 138 7 C4H (60) View species results
Steroid pathway 127 11 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1615 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 366 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
PHvul01G0002240.1 Steroid BR6OX1/CYP85A1 medium borderline
PHvul01G0003740.1 Steroid BR6OX1/CYP85A1 medium borderline
PHvul01G0003740.2 Steroid BR6OX1/CYP85A1 medium borderline
PHvul02G0000560.1 Steroid BR6OX1/CYP85A1 medium borderline
PHvul02G0012230.1 Steroid BR6OX1/CYP85A1 medium borderline
PHvul02G0024870.1 Steroid BR6OX1/CYP85A1 medium borderline
PHvul03G0005300.1 Steroid BR6OX1/CYP85A1 medium borderline
PHvul03G0005310.1 Steroid BR6OX1/CYP85A1 medium borderline
PHvul03G0029700.1 Steroid BR6OX1/CYP85A1 medium borderline
PHvul04G0002460.1 Steroid BR6OX1/CYP85A1 medium borderline
PHvul05G0017350.1 Steroid BR6OX1/CYP85A1 low borderline
PHvul07G0012550.1 Steroid BR6OX1/CYP85A1 low borderline
PHvul08G0027910.1 Steroid BR6OX1/CYP85A1 medium borderline
PHvul09G0008050.1 Steroid BR6OX1/CYP85A1 medium borderline
PHvul09G0008050.2 Steroid BR6OX1/CYP85A1 medium borderline
PHvul10G0004320.1 Steroid BR6OX1/CYP85A1 medium borderline
PHvul10G0013160.1 Steroid BR6OX1/CYP85A1 medium borderline
PHvul11G0001690.1 Steroid BR6OX1/CYP85A1 medium borderline
PHvul01G0011140.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul01G0013650.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul01G0013660.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul01G0013700.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul01G0025960.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul02G0002480.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul02G0002500.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul02G0009990.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul02G0012520.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul02G0028910.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul03G0000080.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul03G0001010.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul03G0001030.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul03G0004200.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul03G0007730.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul03G0018550.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul03G0018790.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul03G0018790.2 Steroid BR6OX2/CYP85A2 low borderline
PHvul03G0018790.3 Steroid BR6OX2/CYP85A2 low borderline
PHvul03G0021670.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul03G0026390.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul04G0000490.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul04G0000530.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul04G0000540.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul04G0000550.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul04G0000560.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul04G0000570.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul04G0000590.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul04G0009310.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul04G0012170.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul05G0001530.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul05G0001530.2 Steroid BR6OX2/CYP85A2 low borderline