PlantSME Plant secondary metabolism enzyme database

Phaseolus vulgaris (phaseolus_vulgaris)

Imported from atlas release summary for Phaseolus vulgaris.

2008
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 572 20 BAHD (235) View species results
Alkaloid pathway 473 20 7DLGT (83) View species results
Phenylpropanoid pathway 419 11 POD (185) View species results
Flavonoid pathway 279 10 UFGT (189) View species results
Rosmarinic acid pathway 138 7 C4H (60) View species results
Steroid pathway 127 11 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1615 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 366 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
PHvul05G0006490.1 Steroid BR6OX2/CYP85A2 medium borderline
PHvul06G0001340.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul06G0002240.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul06G0005030.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul06G0006290.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul06G0007820.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul06G0017500.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul07G0006410.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul07G0010730.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul08G0024850.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul09G0006060.1 Steroid BR6OX2/CYP85A2 medium borderline
PHvul09G0006060.2 Steroid BR6OX2/CYP85A2 medium borderline
PHvul09G0008380.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul09G0008400.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul10G0001350.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul10G0001810.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul10G0001860.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul10G0001870.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul10G0006960.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul10G0007080.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul10G0007190.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul10G0010050.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul10G0011730.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul10G0012940.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul11G0000020.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul11G0015740.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul11G0015900.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul11G0015950.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul11G0015960.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul11G0016410.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul11G0021310.1 Steroid BR6OX2/CYP85A2 low borderline
PHvulscaffold_170002440.1 Steroid BR6OX2/CYP85A2 low borderline
PHvul01G0010060.1 Steroid CAS medium pass
PHvul01G0014940.1 Steroid CAS medium pass
PHvul01G0014960.1 Steroid CAS medium pass
PHvul01G0014960.2 Steroid CAS medium pass
PHvul02G0004530.1 Steroid CAS medium pass
PHvul02G0021690.1 Steroid CAS low borderline
PHvul02G0021690.2 Steroid CAS low borderline
PHvul02G0021710.1 Steroid CAS low borderline
PHvul02G0030110.1 Steroid CAS medium pass
PHvul03G0006200.1 Steroid CAS medium pass
PHvul03G0018250.1 Steroid CAS medium pass
PHvul04G0018250.1 Steroid CAS medium pass
PHvul04G0018260.1 Steroid CAS medium pass
PHvul04G0018280.1 Steroid CAS medium pass
PHvul05G0004820.1 Steroid CAS medium pass
PHvul05G0004820.2 Steroid CAS medium pass
PHvul05G0011120.1 Steroid CAS medium pass
PHvul05G0011130.1 Steroid CAS medium pass