PlantSME Plant secondary metabolism enzyme database

Phaseolus vulgaris (phaseolus_vulgaris)

Imported from atlas release summary for Phaseolus vulgaris.

2318
Candidate Protein Records
2008
Pathway-Level Records
4679
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 572 20 BAHD (235) View species results
Alkaloid pathway 473 20 7DLGT (83) View species results
Phenylpropanoid pathway 419 11 POD (185) View species results
Flavonoid pathway 279 10 UFGT (189) View species results
Rosmarinic acid pathway 138 7 C4H (60) View species results
Steroid pathway 127 11 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1615 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 366 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
PHvul05G0004820.1 Alkaloid GES medium pass
PHvul05G0004820.2 Alkaloid GES medium pass
PHvul05G0008700.1 Alkaloid GES medium pass
PHvul05G0008700.2 Alkaloid GES medium pass
PHvul05G0011120.1 Alkaloid GES medium pass
PHvul05G0011130.1 Alkaloid GES medium pass
PHvul05G0011130.2 Alkaloid GES medium pass
PHvul05G0011130.3 Alkaloid GES medium pass
PHvul05G0011140.1 Alkaloid GES medium pass
PHvul05G0011160.1 Alkaloid GES medium pass
PHvul05G0013390.1 Alkaloid GES medium pass
PHvul05G0013400.1 Alkaloid GES medium pass
PHvul05G0013410.1 Alkaloid GES medium pass
PHvul05G0013590.1 Alkaloid GES medium pass
PHvul05G0013610.1 Alkaloid GES medium pass
PHvul05G0013620.1 Alkaloid GES medium pass
PHvul06G0019700.1 Alkaloid GES medium pass
PHvul06G0019710.1 Alkaloid GES medium pass
PHvul11G0001370.1 Alkaloid GES medium pass
PHvul11G0010730.1 Alkaloid GES medium pass
PHvul11G0010740.1 Alkaloid GES medium pass
PHvul11G0010770.1 Alkaloid GES medium pass
PHvul11G0014110.1 Alkaloid GES medium pass
PHvul11G0014110.2 Alkaloid GES medium pass
PHvul11G0014120.1 Alkaloid GES medium pass
PHvul11G0014120.2 Alkaloid GES medium pass
PHvul11G0014130.1 Alkaloid GES medium pass
PHvul11G0014140.1 Alkaloid GES medium pass
PHvul11G0014150.1 Alkaloid GES low borderline
PHvul11G0014170.1 Alkaloid GES medium pass
PHvul11G0014170.2 Alkaloid GES medium pass
PHvul11G0014450.1 Alkaloid GES medium pass
PHvul11G0014460.1 Alkaloid GES medium pass
PHvul11G0014470.1 Alkaloid GES medium pass
PHvul11G0014490.1 Alkaloid GES medium pass
PHvul11G0014500.1 Alkaloid GES medium pass
PHvul11G0014540.1 Alkaloid GES medium pass
PHvul11G0014540.2 Alkaloid GES medium pass
PHvul11G0014560.1 Alkaloid GES medium pass
PHvul11G0014560.2 Alkaloid GES medium pass
PHvul11G0014570.1 Alkaloid GES medium pass
PHvul11G0014610.1 Alkaloid GES medium pass
PHvul01G0000370.1 Alkaloid GS high pass
PHvul02G0014490.1 Alkaloid GS high pass
PHvul02G0014500.1 Alkaloid GS high pass
PHvul02G0014510.1 Alkaloid GS high pass
PHvul02G0014520.1 Alkaloid GS high pass
PHvul02G0026600.1 Alkaloid GS high pass
PHvul02G0027570.1 Alkaloid GS medium pass
PHvul03G0003030.1 Alkaloid GS high pass