PlantSME Plant secondary metabolism enzyme database

Phaseolus vulgaris (phaseolus_vulgaris)

Imported from atlas release summary for Phaseolus vulgaris.

2318
Candidate Protein Records
2008
Pathway-Level Records
4679
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 572 20 BAHD (235) View species results
Alkaloid pathway 473 20 7DLGT (83) View species results
Phenylpropanoid pathway 419 11 POD (185) View species results
Flavonoid pathway 279 10 UFGT (189) View species results
Rosmarinic acid pathway 138 7 C4H (60) View species results
Steroid pathway 127 11 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1615 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 366 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
PHvul04G0012190.1 Alkaloid T3O medium borderline
PHvul04G0016350.1 Alkaloid T3O medium borderline
PHvul04G0016350.2 Alkaloid T3O medium borderline
PHvul04G0016370.1 Alkaloid T3O medium borderline
PHvul05G0001530.1 Alkaloid T3O medium pass
PHvul05G0005290.1 Alkaloid T3O medium pass
PHvul05G0005310.1 Alkaloid T3O medium pass
PHvul06G0002240.1 Alkaloid T3O medium borderline
PHvul06G0003330.1 Alkaloid T3O medium borderline
PHvul06G0004940.1 Alkaloid T3O medium borderline
PHvul06G0004950.1 Alkaloid T3O medium borderline
PHvul06G0004960.1 Alkaloid T3O medium borderline
PHvul06G0005000.1 Alkaloid T3O medium borderline
PHvul06G0005030.1 Alkaloid T3O medium borderline
PHvul06G0005050.1 Alkaloid T3O medium borderline
PHvul06G0005060.1 Alkaloid T3O medium borderline
PHvul06G0005070.1 Alkaloid T3O medium borderline
PHvul06G0007710.1 Alkaloid T3O medium pass
PHvul06G0007770.1 Alkaloid T3O medium pass
PHvul06G0008050.1 Alkaloid T3O medium pass
PHvul06G0016350.1 Alkaloid T3O low borderline
PHvul06G0021110.1 Alkaloid T3O medium borderline
PHvul06G0021120.1 Alkaloid T3O medium borderline
PHvul06G0021130.1 Alkaloid T3O medium borderline
PHvul07G0005570.1 Alkaloid T3O low borderline
PHvul07G0006410.1 Alkaloid T3O medium pass
PHvul07G0008700.1 Alkaloid T3O medium borderline
PHvul07G0010730.1 Alkaloid T3O medium borderline
PHvul07G0016510.1 Alkaloid T3O medium pass
PHvul07G0021550.1 Alkaloid T3O medium pass
PHvul07G0024320.1 Alkaloid T3O medium borderline
PHvul08G0002950.1 Alkaloid T3O medium pass
PHvul08G0002950.2 Alkaloid T3O medium pass
PHvul08G0003580.1 Alkaloid T3O medium pass
PHvul08G0003590.1 Alkaloid T3O medium pass
PHvul08G0005850.1 Alkaloid T3O medium pass
PHvul08G0012930.1 Alkaloid T3O medium borderline
PHvul08G0014690.1 Alkaloid T3O medium borderline
PHvul08G0015630.1 Alkaloid T3O medium pass
PHvul08G0015630.2 Alkaloid T3O medium pass
PHvul08G0022850.1 Alkaloid T3O medium pass
PHvul08G0023630.1 Alkaloid T3O medium pass
PHvul08G0026410.1 Alkaloid T3O low borderline
PHvul08G0027910.1 Alkaloid T3O medium borderline
PHvul09G0006060.1 Alkaloid T3O medium pass
PHvul09G0006060.2 Alkaloid T3O medium pass
PHvul09G0006240.1 Alkaloid T3O medium borderline
PHvul09G0006250.1 Alkaloid T3O medium borderline
PHvul09G0006260.1 Alkaloid T3O medium borderline
PHvul09G0006270.1 Alkaloid T3O medium borderline