PlantSME Plant secondary metabolism enzyme database

Phaseolus vulgaris (phaseolus_vulgaris)

Imported from atlas release summary for Phaseolus vulgaris.

2318
Candidate Protein Records
2008
Pathway-Level Records
4679
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 572 20 BAHD (235) View species results
Alkaloid pathway 473 20 7DLGT (83) View species results
Phenylpropanoid pathway 419 11 POD (185) View species results
Flavonoid pathway 279 10 UFGT (189) View species results
Rosmarinic acid pathway 138 7 C4H (60) View species results
Steroid pathway 127 11 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1615 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 366 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
PHvul09G0017620.1 Alkaloid T3O medium borderline
PHvul09G0024990.1 Alkaloid T3O medium borderline
PHvul09G0025000.1 Alkaloid T3O medium borderline
PHvul10G0001090.1 Alkaloid T3O medium borderline
PHvul10G0001100.1 Alkaloid T3O medium borderline
PHvul10G0002160.1 Alkaloid T3O medium borderline
PHvul10G0006950.1 Alkaloid T3O medium borderline
PHvul10G0007020.1 Alkaloid T3O low borderline
PHvul10G0007080.1 Alkaloid T3O medium borderline
PHvul10G0007190.1 Alkaloid T3O medium borderline
PHvul10G0008050.1 Alkaloid T3O medium borderline
PHvul10G0012940.1 Alkaloid T3O medium borderline
PHvul10G0013160.1 Alkaloid T3O low borderline
PHvul10G0014050.1 Alkaloid T3O medium pass
PHvul11G0003070.1 Alkaloid T3O medium pass
PHvul11G0007020.1 Alkaloid T3O medium borderline
PHvul11G0009250.1 Alkaloid T3O medium pass
PHvul11G0021310.1 Alkaloid T3O medium borderline
PHvul02G0020260.1 Alkaloid TDC low borderline
PHvul02G0020260.2 Alkaloid TDC low borderline
PHvul02G0020260.3 Alkaloid TDC low borderline
PHvul06G0021090.1 Alkaloid TDC low borderline
PHvul08G0001730.1 Alkaloid TDC low borderline
PHvul08G0001730.2 Alkaloid TDC low borderline
PHvul01G0008300.1 Alkaloid TRI/TRII medium pass
PHvul01G0008300.2 Alkaloid TRI/TRII medium pass
PHvul01G0010690.1 Alkaloid TRI/TRII medium pass
PHvul01G0019130.1 Alkaloid TRI/TRII medium pass
PHvul01G0019140.1 Alkaloid TRI/TRII medium pass
PHvul01G0020000.1 Alkaloid TRI/TRII medium pass
PHvul01G0021430.1 Alkaloid TRI/TRII medium pass
PHvul01G0021440.1 Alkaloid TRI/TRII medium pass
PHvul01G0021450.1 Alkaloid TRI/TRII medium pass
PHvul01G0023270.1 Alkaloid TRI/TRII medium pass
PHvul01G0023280.1 Alkaloid TRI/TRII medium pass
PHvul01G0023290.1 Alkaloid TRI/TRII medium pass
PHvul01G0023370.1 Alkaloid TRI/TRII medium pass
PHvul01G0023380.1 Alkaloid TRI/TRII medium pass
PHvul01G0025750.1 Alkaloid TRI/TRII medium pass
PHvul03G0006190.1 Alkaloid TRI/TRII low borderline
PHvul03G0008330.1 Alkaloid TRI/TRII medium pass
PHvul03G0009560.1 Alkaloid TRI/TRII low borderline
PHvul03G0030040.1 Alkaloid TRI/TRII low borderline
PHvul04G0011560.1 Alkaloid TRI/TRII low borderline
PHvul04G0011560.2 Alkaloid TRI/TRII low borderline
PHvul04G0013750.1 Alkaloid TRI/TRII medium pass
PHvul04G0013780.1 Alkaloid TRI/TRII medium pass
PHvul05G0003090.1 Alkaloid TRI/TRII medium pass
PHvul05G0003090.2 Alkaloid TRI/TRII medium pass
PHvul05G0003100.1 Alkaloid TRI/TRII medium pass