PlantSME Plant secondary metabolism enzyme database

Phaseolus vulgaris (phaseolus_vulgaris)

Imported from atlas release summary for Phaseolus vulgaris.

2318
Candidate Protein Records
2008
Pathway-Level Records
4679
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 572 20 BAHD (235) View species results
Alkaloid pathway 473 20 7DLGT (83) View species results
Phenylpropanoid pathway 419 11 POD (185) View species results
Flavonoid pathway 279 10 UFGT (189) View species results
Rosmarinic acid pathway 138 7 C4H (60) View species results
Steroid pathway 127 11 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1615 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 366 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
PHvul03G0005250.1 Flavonoid 4CL low borderline
PHvul03G0011240.1 Flavonoid 4CL medium pass
PHvul03G0013420.1 Flavonoid 4CL low borderline
PHvul03G0014920.1 Flavonoid 4CL medium pass
PHvul03G0014930.1 Flavonoid 4CL medium pass
PHvul03G0027350.1 Flavonoid 4CL medium pass
PHvul04G0005910.1 Flavonoid 4CL medium pass
PHvul04G0011710.1 Flavonoid 4CL medium pass
PHvul04G0011710.2 Flavonoid 4CL medium pass
PHvul05G0013220.1 Flavonoid 4CL medium pass
PHvul05G0017440.1 Flavonoid 4CL medium pass
PHvul06G0000620.1 Flavonoid 4CL low borderline
PHvul06G0000640.1 Flavonoid 4CL low borderline
PHvul06G0000640.2 Flavonoid 4CL low borderline
PHvul06G0005320.1 Flavonoid 4CL medium pass
PHvul06G0007800.1 Flavonoid 4CL medium pass
PHvul06G0008500.1 Flavonoid 4CL medium pass
PHvul06G0012230.1 Flavonoid 4CL medium pass
PHvul06G0012750.1 Flavonoid 4CL low borderline
PHvul06G0012750.2 Flavonoid 4CL low borderline
PHvul06G0012750.3 Flavonoid 4CL low borderline
PHvul06G0012750.4 Flavonoid 4CL low borderline
PHvul07G0005480.1 Flavonoid 4CL low borderline
PHvul07G0007160.1 Flavonoid 4CL medium pass
PHvul07G0012710.1 Flavonoid 4CL medium pass
PHvul07G0019810.1 Flavonoid 4CL low borderline
PHvul08G0016250.1 Flavonoid 4CL medium pass
PHvul08G0024370.1 Flavonoid 4CL medium pass
PHvul08G0024380.1 Flavonoid 4CL medium pass
PHvul09G0012860.1 Flavonoid 4CL low borderline
PHvul09G0017180.1 Flavonoid 4CL medium pass
PHvul09G0017190.1 Flavonoid 4CL medium pass
PHvul10G0007180.1 Flavonoid 4CL low borderline
PHvul10G0014940.1 Flavonoid 4CL low borderline
PHvul11G0002040.1 Flavonoid 4CL medium pass
PHvul11G0005110.1 Flavonoid 4CL low borderline
PHvul11G0005110.2 Flavonoid 4CL low borderline
PHvul11G0005110.3 Flavonoid 4CL low borderline
PHvul11G0005880.1 Flavonoid 4CL low borderline
PHvul11G0008490.1 Flavonoid 4CL medium pass
PHvul01G0001260.1 Flavonoid ANR medium borderline
PHvul01G0001270.1 Flavonoid ANR medium borderline
PHvul02G0013990.1 Flavonoid ANR low borderline
PHvul02G0021640.1 Flavonoid ANR medium borderline
PHvul02G0021650.1 Flavonoid ANR medium borderline
PHvul03G0003190.1 Flavonoid ANR medium borderline
PHvul04G0001440.1 Flavonoid ANR low borderline
PHvul05G0003390.1 Flavonoid ANR medium borderline
PHvul05G0003400.1 Flavonoid ANR medium borderline
PHvul05G0003410.1 Flavonoid ANR medium borderline