PlantSME Plant secondary metabolism enzyme database

Phaseolus vulgaris (phaseolus_vulgaris)

Imported from atlas release summary for Phaseolus vulgaris.

2318
Candidate Protein Records
2008
Pathway-Level Records
4679
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 572 20 BAHD (235) View species results
Alkaloid pathway 473 20 7DLGT (83) View species results
Phenylpropanoid pathway 419 11 POD (185) View species results
Flavonoid pathway 279 10 UFGT (189) View species results
Rosmarinic acid pathway 138 7 C4H (60) View species results
Steroid pathway 127 11 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1615 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 366 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
PHvul05G0003420.1 Flavonoid ANR medium borderline
PHvul05G0003430.1 Flavonoid ANR medium borderline
PHvul05G0003440.1 Flavonoid ANR medium borderline
PHvul05G0003450.1 Flavonoid ANR medium borderline
PHvul05G0008740.1 Flavonoid ANR medium borderline
PHvul05G0015660.1 Flavonoid ANR medium borderline
PHvul06G0011060.1 Flavonoid ANR medium borderline
PHvul07G0023200.1 Flavonoid ANR medium borderline
PHvul08G0007890.1 Flavonoid ANR medium borderline
PHvul08G0007890.2 Flavonoid ANR medium borderline
PHvul08G0007890.3 Flavonoid ANR medium borderline
PHvul08G0007900.1 Flavonoid ANR medium borderline
PHvul08G0007900.2 Flavonoid ANR medium borderline
PHvul08G0007910.1 Flavonoid ANR medium borderline
PHvul08G0007910.2 Flavonoid ANR medium borderline
PHvul08G0007920.1 Flavonoid ANR medium borderline
PHvul08G0025920.1 Flavonoid ANR medium borderline
PHvul08G0025920.2 Flavonoid ANR medium borderline
PHvul08G0025930.1 Flavonoid ANR medium borderline
PHvul08G0025930.2 Flavonoid ANR medium borderline
PHvul08G0025940.1 Flavonoid ANR medium borderline
PHvul08G0025950.1 Flavonoid ANR medium borderline
PHvul09G0008660.1 Flavonoid ANR low borderline
PHvul11G0002240.1 Flavonoid ANR medium borderline
PHvul11G0002250.1 Flavonoid ANR medium borderline
PHvul11G0002260.1 Flavonoid ANR medium borderline
PHvul11G0002270.1 Flavonoid ANR medium borderline
PHvul11G0014070.1 Flavonoid ANR medium borderline
PHvul11G0014070.2 Flavonoid ANR medium borderline
PHvul11G0021210.1 Flavonoid ANR medium borderline
PHvul11G0021230.1 Flavonoid ANR medium borderline
PHvul11G0021230.2 Flavonoid ANR medium borderline
PHvul01G0021330.1 Flavonoid ANS/LDOX medium borderline
PHvul05G0007360.1 Flavonoid ANS/LDOX medium pass
PHvul05G0007360.2 Flavonoid ANS/LDOX medium pass
PHvul05G0007360.3 Flavonoid ANS/LDOX medium pass
PHvul05G0007360.4 Flavonoid ANS/LDOX medium pass
PHvul06G0016470.1 Flavonoid ANS/LDOX medium borderline
PHvul07G0019790.1 Flavonoid ANS/LDOX medium borderline
PHvul10G0009910.1 Flavonoid ANS/LDOX medium borderline
PHvul06G0007820.1 Flavonoid C4H medium borderline
PHvul06G0008050.1 Flavonoid C4H low borderline
PHvul08G0024850.1 Flavonoid C4H medium borderline
PHvul01G0003820.1 Flavonoid CHI low borderline
PHvul02G0027420.1 Flavonoid CHI medium pass
PHvul03G0021910.1 Flavonoid CHI medium pass
PHvul05G0006440.1 Flavonoid CHI low borderline
PHvul05G0006450.1 Flavonoid CHI low borderline
PHvul05G0006450.2 Flavonoid CHI low borderline
PHvul07G0000820.1 Flavonoid CHI medium pass