PlantSME Plant secondary metabolism enzyme database

Phaseolus vulgaris (phaseolus_vulgaris)

Imported from atlas release summary for Phaseolus vulgaris.

2008
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 572 20 BAHD (235) View species results
Alkaloid pathway 473 20 7DLGT (83) View species results
Phenylpropanoid pathway 419 11 POD (185) View species results
Flavonoid pathway 279 10 UFGT (189) View species results
Rosmarinic acid pathway 138 7 C4H (60) View species results
Steroid pathway 127 11 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1615 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 366 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
PHvul11G0014170.1 Steroid CAS medium pass
PHvul11G0014170.2 Steroid CAS low borderline
PHvul11G0014450.1 Steroid CAS medium pass
PHvul11G0014470.1 Steroid CAS low borderline
PHvul11G0014490.1 Steroid CAS low borderline
PHvul11G0014500.1 Steroid CAS low borderline
PHvul11G0014540.1 Steroid CAS low borderline
PHvul11G0014540.2 Steroid CAS low borderline
PHvul11G0014560.1 Steroid CAS low borderline
PHvul11G0014560.2 Steroid CAS medium pass
PHvul11G0014570.1 Steroid CAS medium pass
PHvul11G0014610.1 Steroid CAS low borderline
PHvul01G0009030.1 Steroid CPD/CYP90A1 low borderline
PHvul01G0011200.1 Steroid CPD/CYP90A1 low borderline
PHvul02G0001450.1 Steroid CPD/CYP90A1 medium borderline
PHvul02G0005980.2 Steroid CPD/CYP90A1 low borderline
PHvul02G0018550.1 Steroid CPD/CYP90A1 low borderline
PHvul03G0000150.1 Steroid CPD/CYP90A1 medium borderline
PHvul03G0016380.1 Steroid CPD/CYP90A1 medium borderline
PHvul03G0028310.1 Steroid CPD/CYP90A1 medium borderline
PHvul04G0008530.1 Steroid CPD/CYP90A1 medium borderline
PHvul05G0005300.1 Steroid CPD/CYP90A1 medium borderline
PHvul06G0008040.1 Steroid CPD/CYP90A1 low borderline
PHvul07G0010570.1 Steroid CPD/CYP90A1 medium borderline
PHvul07G0021230.1 Steroid CPD/CYP90A1 low borderline
PHvul09G0024980.1 Steroid CPD/CYP90A1 medium borderline
PHvul09G0024990.1 Steroid CPD/CYP90A1 medium borderline
PHvul10G0007020.1 Steroid CPD/CYP90A1 low borderline
PHvul11G0015910.1 Steroid CPD/CYP90A1 low borderline
PHvul03G0005460.1 Steroid CPI1 low borderline
PHvul09G0017160.1 Steroid CPI1 high pass
PHvul01G0018330.1 Steroid CYP51G1 medium borderline
PHvul02G0002490.1 Steroid CYP51G1 medium borderline
PHvul02G0002510.1 Steroid CYP51G1 medium borderline
PHvul02G0011190.1 Steroid CYP51G1 medium borderline
PHvul02G0022430.1 Steroid CYP51G1 medium borderline
PHvul03G0008620.1 Steroid CYP51G1 medium borderline
PHvul03G0009040.1 Steroid CYP51G1 medium borderline
PHvul03G0021680.1 Steroid CYP51G1 medium borderline
PHvul03G0026400.1 Steroid CYP51G1 medium borderline
PHvul06G0004940.1 Steroid CYP51G1 medium borderline
PHvul06G0004960.1 Steroid CYP51G1 medium borderline
PHvul06G0005000.1 Steroid CYP51G1 medium borderline
PHvul06G0005020.1 Steroid CYP51G1 medium borderline
PHvul06G0005050.1 Steroid CYP51G1 medium borderline
PHvul06G0005060.1 Steroid CYP51G1 medium borderline
PHvul06G0005070.1 Steroid CYP51G1 medium borderline
PHvul06G0021110.1 Steroid CYP51G1 medium borderline
PHvul06G0021120.1 Steroid CYP51G1 medium borderline
PHvul06G0021130.1 Steroid CYP51G1 medium borderline