PlantSME Plant secondary metabolism enzyme database

Phaseolus vulgaris (phaseolus_vulgaris)

Imported from atlas release summary for Phaseolus vulgaris.

2008
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 572 20 BAHD (235) View species results
Alkaloid pathway 473 20 7DLGT (83) View species results
Phenylpropanoid pathway 419 11 POD (185) View species results
Flavonoid pathway 279 10 UFGT (189) View species results
Rosmarinic acid pathway 138 7 C4H (60) View species results
Steroid pathway 127 11 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1615 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 366 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
PHvul07G0000300.1 Steroid CYP51G1 medium borderline
PHvul07G0002570.1 Steroid CYP51G1 medium borderline
PHvul10G0005130.1 Steroid CYP51G1 medium borderline
PHvul11G0007020.1 Steroid CYP51G1 medium borderline
PHvul01G0000880.1 Steroid CYP90D1 low borderline
PHvul01G0005260.1 Steroid CYP90D1 low borderline
PHvul01G0013680.1 Steroid CYP90D1 low borderline
PHvul01G0024020.1 Steroid CYP90D1 medium borderline
PHvul02G0002270.1 Steroid CYP90D1 low borderline
PHvul02G0012610.1 Steroid CYP90D1 low borderline
PHvul02G0012620.1 Steroid CYP90D1 low borderline
PHvul02G0012620.2 Steroid CYP90D1 low borderline
PHvul02G0012620.3 Steroid CYP90D1 low borderline
PHvul03G0001000.1 Steroid CYP90D1 low borderline
PHvul03G0001020.1 Steroid CYP90D1 low borderline
PHvul03G0003380.1 Steroid CYP90D1 low borderline
PHvul03G0003380.2 Steroid CYP90D1 low borderline
PHvul03G0004090.1 Steroid CYP90D1 medium borderline
PHvul03G0005290.1 Steroid CYP90D1 low borderline
PHvul03G0007470.1 Steroid CYP90D1 low borderline
PHvul03G0025780.1 Steroid CYP90D1 medium borderline
PHvul04G0002500.1 Steroid CYP90D1 low borderline
PHvul04G0002550.1 Steroid CYP90D1 low borderline
PHvul04G0012130.1 Steroid CYP90D1 low borderline
PHvul04G0016350.1 Steroid CYP90D1 low borderline
PHvul04G0016350.2 Steroid CYP90D1 low borderline
PHvul05G0005310.1 Steroid CYP90D1 medium borderline
PHvul05G0006330.1 Steroid CYP90D1 low borderline
PHvul05G0006350.1 Steroid CYP90D1 low borderline
PHvul05G0011710.1 Steroid CYP90D1 low borderline
PHvul06G0003330.1 Steroid CYP90D1 low borderline
PHvul07G0024300.1 Steroid CYP90D1 low borderline
PHvul07G0024310.1 Steroid CYP90D1 low borderline
PHvul08G0012930.1 Steroid CYP90D1 low borderline
PHvul08G0014690.1 Steroid CYP90D1 low borderline
PHvul08G0015630.1 Steroid CYP90D1 medium borderline
PHvul08G0022850.1 Steroid CYP90D1 medium borderline
PHvul08G0023630.1 Steroid CYP90D1 medium borderline
PHvul09G0004120.1 Steroid CYP90D1 low borderline
PHvul09G0006270.1 Steroid CYP90D1 low borderline
PHvul09G0020440.1 Steroid CYP90D1 low borderline
PHvul10G0002180.1 Steroid CYP90D1 low borderline
PHvul10G0002190.1 Steroid CYP90D1 low borderline
PHvul10G0014050.1 Steroid CYP90D1 medium borderline
PHvul02G0000980.1 Steroid DET2 low borderline
PHvul02G0032900.1 Steroid DET2 medium borderline
PHvul02G0032900.2 Steroid DET2 medium borderline
PHvul04G0009840.1 Steroid DET2 medium pass
PHvul04G0009850.1 Steroid DET2 low borderline
PHvul08G0010630.1 Steroid DET2 medium pass