PlantSME Plant secondary metabolism enzyme database

Phaseolus vulgaris (phaseolus_vulgaris)

Imported from atlas release summary for Phaseolus vulgaris.

2318
Candidate Protein Records
2008
Pathway-Level Records
4679
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 572 20 BAHD (235) View species results
Alkaloid pathway 473 20 7DLGT (83) View species results
Phenylpropanoid pathway 419 11 POD (185) View species results
Flavonoid pathway 279 10 UFGT (189) View species results
Rosmarinic acid pathway 138 7 C4H (60) View species results
Steroid pathway 127 11 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1615 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 366 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
PHvul10G0001860.1 Alkaloid 7DLH medium borderline
PHvul10G0001870.1 Alkaloid 7DLH medium borderline
PHvul10G0004320.1 Alkaloid 7DLH medium borderline
PHvul10G0010050.1 Alkaloid 7DLH medium borderline
PHvul11G0015900.1 Alkaloid 7DLH medium borderline
PHvul11G0015910.1 Alkaloid 7DLH medium borderline
PHvul11G0015930.1 Alkaloid 7DLH medium borderline
PHvul11G0015950.1 Alkaloid 7DLH medium borderline
PHvul11G0015960.1 Alkaloid 7DLH medium borderline
PHvul11G0015980.1 Alkaloid 7DLH medium borderline
PHvul11G0016410.1 Alkaloid 7DLH medium borderline
PHvul01G0006480.1 Alkaloid 8HGO medium borderline
PHvul01G0006790.1 Alkaloid 8HGO medium borderline
PHvul01G0016480.1 Alkaloid 8HGO medium borderline
PHvul01G0016480.2 Alkaloid 8HGO medium borderline
PHvul04G0013920.1 Alkaloid 8HGO medium borderline
PHvul06G0022400.1 Alkaloid 8HGO low borderline
PHvul07G0014040.1 Alkaloid 8HGO medium borderline
PHvul08G0010250.1 Alkaloid 8HGO medium borderline
PHvul08G0021170.1 Alkaloid 8HGO medium borderline
PHvul08G0021180.1 Alkaloid 8HGO medium borderline
PHvul08G0021190.1 Alkaloid 8HGO medium borderline
PHvul09G0013870.1 Alkaloid 8HGO medium borderline
PHvul09G0015390.1 Alkaloid 8HGO medium borderline
PHvul11G0001820.1 Alkaloid 8HGO medium borderline
PHvulscaffold_130000640.1 Alkaloid 8HGO medium borderline
PHvulscaffold_130000640.2 Alkaloid 8HGO medium borderline
PHvul09G0000250.1 Alkaloid ADC medium pass
PHvul01G0007490.1 Alkaloid BBE low borderline
PHvul01G0019890.1 Alkaloid BBE low borderline
PHvul01G0019890.2 Alkaloid BBE low borderline
PHvul01G0019890.3 Alkaloid BBE low borderline
PHvul01G0019890.4 Alkaloid BBE low borderline
PHvul02G0019660.1 Alkaloid BBE medium borderline
PHvul02G0019680.1 Alkaloid BBE medium borderline
PHvul02G0019690.1 Alkaloid BBE medium borderline
PHvul02G0019700.1 Alkaloid BBE medium borderline
PHvul02G0019710.1 Alkaloid BBE medium borderline
PHvul02G0019730.1 Alkaloid BBE medium borderline
PHvul02G0019740.1 Alkaloid BBE medium borderline
PHvul02G0019750.1 Alkaloid BBE medium borderline
PHvul02G0019760.1 Alkaloid BBE medium borderline
PHvul02G0019770.1 Alkaloid BBE medium borderline
PHvul02G0019780.1 Alkaloid BBE medium borderline
PHvul02G0019790.1 Alkaloid BBE medium borderline
PHvul02G0019800.1 Alkaloid BBE medium borderline
PHvul02G0019810.1 Alkaloid BBE medium borderline
PHvul02G0019820.1 Alkaloid BBE medium borderline
PHvul02G0019830.1 Alkaloid BBE medium borderline
PHvul02G0019840.1 Alkaloid BBE medium borderline