PlantSME Plant secondary metabolism enzyme database

Phaseolus vulgaris (phaseolus_vulgaris)

Imported from atlas release summary for Phaseolus vulgaris.

2318
Candidate Protein Records
2008
Pathway-Level Records
4679
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 572 20 BAHD (235) View species results
Alkaloid pathway 473 20 7DLGT (83) View species results
Phenylpropanoid pathway 419 11 POD (185) View species results
Flavonoid pathway 279 10 UFGT (189) View species results
Rosmarinic acid pathway 138 7 C4H (60) View species results
Steroid pathway 127 11 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1615 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 366 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
PHvul02G0019860.1 Alkaloid BBE medium borderline
PHvul02G0019870.1 Alkaloid BBE medium borderline
PHvul02G0019920.1 Alkaloid BBE medium borderline
PHvul02G0021960.1 Alkaloid BBE medium borderline
PHvul02G0021970.1 Alkaloid BBE medium borderline
PHvul02G0021980.1 Alkaloid BBE medium borderline
PHvul02G0021990.1 Alkaloid BBE medium borderline
PHvul02G0022000.1 Alkaloid BBE medium borderline
PHvul02G0022010.1 Alkaloid BBE medium borderline
PHvul02G0023160.1 Alkaloid BBE medium borderline
PHvul05G0000430.1 Alkaloid BBE medium borderline
PHvul05G0000450.1 Alkaloid BBE medium borderline
PHvul06G0012400.1 Alkaloid BBE medium borderline
PHvul06G0012410.1 Alkaloid BBE medium borderline
PHvul06G0012420.1 Alkaloid BBE medium borderline
PHvul06G0012430.1 Alkaloid BBE medium borderline
PHvul06G0012440.1 Alkaloid BBE medium borderline
PHvul06G0012480.1 Alkaloid BBE medium borderline
PHvul06G0012490.1 Alkaloid BBE medium borderline
PHvul06G0012500.1 Alkaloid BBE medium borderline
PHvul06G0012510.1 Alkaloid BBE medium borderline
PHvul06G0012520.1 Alkaloid BBE medium borderline
PHvul07G0011610.1 Alkaloid BBE medium borderline
PHvul01G0019820.1 Alkaloid CNMT low borderline
PHvul02G0006390.1 Alkaloid CNMT low borderline
PHvul02G0006390.2 Alkaloid CNMT low borderline
PHvul02G0006390.3 Alkaloid CNMT low borderline
PHvul02G0006390.4 Alkaloid CNMT low borderline
PHvul02G0006390.5 Alkaloid CNMT low borderline
PHvul02G0006390.6 Alkaloid CNMT low borderline
PHvul02G0028000.1 Alkaloid CNMT low borderline
PHvul02G0028000.2 Alkaloid CNMT low borderline
PHvul07G0010700.1 Alkaloid CNMT low borderline
PHvul07G0010700.2 Alkaloid CNMT low borderline
PHvul08G0000930.1 Alkaloid CNMT low borderline
PHvul08G0026550.1 Alkaloid CNMT low borderline
PHvul09G0005580.1 Alkaloid CNMT low borderline
PHvul09G0008200.1 Alkaloid CNMT medium borderline
PHvul10G0000130.1 Alkaloid CNMT low borderline
PHvul10G0003940.1 Alkaloid CNMT low borderline
PHvul11G0001200.1 Alkaloid CNMT low borderline
PHvul11G0004980.1 Alkaloid CNMT low borderline
PHvul01G0005570.1 Alkaloid CODM/T6ODM medium borderline
PHvul01G0006600.1 Alkaloid CODM/T6ODM medium borderline
PHvul01G0006660.1 Alkaloid CODM/T6ODM medium borderline
PHvul01G0012420.1 Alkaloid CODM/T6ODM medium borderline
PHvul01G0012450.1 Alkaloid CODM/T6ODM medium borderline
PHvul01G0024200.1 Alkaloid CODM/T6ODM medium borderline
PHvul02G0005640.1 Alkaloid CODM/T6ODM medium borderline
PHvul02G0015310.1 Alkaloid CODM/T6ODM medium borderline