PlantSME Plant secondary metabolism enzyme database

Phaseolus vulgaris (phaseolus_vulgaris)

Imported from atlas release summary for Phaseolus vulgaris.

2318
Candidate Protein Records
2008
Pathway-Level Records
4679
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 572 20 BAHD (235) View species results
Alkaloid pathway 473 20 7DLGT (83) View species results
Phenylpropanoid pathway 419 11 POD (185) View species results
Flavonoid pathway 279 10 UFGT (189) View species results
Rosmarinic acid pathway 138 7 C4H (60) View species results
Steroid pathway 127 11 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1615 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 366 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
PHvul03G0002090.1 Flavonoid F3H medium borderline
PHvul03G0002090.2 Flavonoid F3H medium borderline
PHvul03G0002090.3 Flavonoid F3H medium borderline
PHvul03G0002100.1 Flavonoid F3H medium borderline
PHvul03G0002110.1 Flavonoid F3H medium borderline
PHvul03G0002120.1 Flavonoid F3H medium borderline
PHvul03G0002120.2 Flavonoid F3H medium borderline
PHvul03G0008290.1 Flavonoid F3H medium borderline
PHvul03G0011880.1 Flavonoid F3H medium borderline
PHvul03G0017400.1 Flavonoid F3H medium borderline
PHvul03G0022620.1 Flavonoid F3H low borderline
PHvul03G0022620.2 Flavonoid F3H low borderline
PHvul03G0024450.1 Flavonoid F3H low borderline
PHvul03G0026660.1 Flavonoid F3H medium borderline
PHvul03G0029800.1 Flavonoid F3H medium borderline
PHvul03G0029800.2 Flavonoid F3H medium borderline
PHvul03G0029810.1 Flavonoid F3H medium borderline
PHvul04G0004540.1 Flavonoid F3H medium borderline
PHvul04G0004540.2 Flavonoid F3H medium borderline
PHvul04G0004540.3 Flavonoid F3H medium borderline
PHvul04G0004540.4 Flavonoid F3H medium borderline
PHvul04G0005290.1 Flavonoid F3H low borderline
PHvul04G0005300.1 Flavonoid F3H low borderline
PHvul04G0005570.1 Flavonoid F3H medium borderline
PHvul04G0012310.1 Flavonoid F3H medium borderline
PHvul04G0012320.1 Flavonoid F3H medium pass
PHvul04G0012320.2 Flavonoid F3H medium borderline
PHvul04G0012330.1 Flavonoid F3H medium borderline
PHvul04G0012340.1 Flavonoid F3H medium borderline
PHvul04G0012340.2 Flavonoid F3H medium borderline
PHvul04G0012350.1 Flavonoid F3H medium borderline
PHvul04G0012630.1 Flavonoid F3H medium borderline
PHvul04G0017500.1 Flavonoid F3H low borderline
PHvul05G0003910.1 Flavonoid F3H medium borderline
PHvul05G0003910.2 Flavonoid F3H medium borderline
PHvul05G0005770.1 Flavonoid F3H medium borderline
PHvul05G0005780.1 Flavonoid F3H medium borderline
PHvul05G0005790.1 Flavonoid F3H medium borderline
PHvul05G0005810.1 Flavonoid F3H medium borderline
PHvul05G0005820.1 Flavonoid F3H medium borderline
PHvul05G0005850.1 Flavonoid F3H medium borderline
PHvul05G0006030.1 Flavonoid F3H medium borderline
PHvul05G0006040.1 Flavonoid F3H medium borderline
PHvul05G0006050.1 Flavonoid F3H medium borderline
PHvul05G0006060.1 Flavonoid F3H medium pass
PHvul05G0007340.1 Flavonoid F3H medium borderline
PHvul05G0007350.1 Flavonoid F3H medium borderline
PHvul05G0007350.2 Flavonoid F3H medium borderline
PHvul05G0008560.1 Flavonoid F3H medium borderline
PHvul05G0008670.1 Flavonoid F3H medium borderline