PlantSME Plant secondary metabolism enzyme database

Phaseolus vulgaris (phaseolus_vulgaris)

Imported from atlas release summary for Phaseolus vulgaris.

2318
Candidate Protein Records
2008
Pathway-Level Records
4679
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 572 20 BAHD (235) View species results
Alkaloid pathway 473 20 7DLGT (83) View species results
Phenylpropanoid pathway 419 11 POD (185) View species results
Flavonoid pathway 279 10 UFGT (189) View species results
Rosmarinic acid pathway 138 7 C4H (60) View species results
Steroid pathway 127 11 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1615 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 366 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
PHvul09G0020440.1 Flavonoid F3'H/CYP75B low borderline
PHvul09G0025230.1 Flavonoid F3'H/CYP75B low borderline
PHvul09G0025230.2 Flavonoid F3'H/CYP75B low borderline
PHvul09G0025230.3 Flavonoid F3'H/CYP75B low borderline
PHvul10G0001090.1 Flavonoid F3'H/CYP75B medium borderline
PHvul10G0001350.1 Flavonoid F3'H/CYP75B medium borderline
PHvul10G0004320.1 Flavonoid F3'H/CYP75B low borderline
PHvul10G0006960.1 Flavonoid F3'H/CYP75B medium borderline
PHvul10G0007190.1 Flavonoid F3'H/CYP75B medium borderline
PHvul10G0007210.1 Flavonoid F3'H/CYP75B medium borderline
PHvul10G0011730.1 Flavonoid F3'H/CYP75B medium borderline
PHvul10G0013160.1 Flavonoid F3'H/CYP75B low borderline
PHvul11G0000020.1 Flavonoid F3'H/CYP75B low borderline
PHvul11G0001690.1 Flavonoid F3'H/CYP75B medium borderline
PHvul11G0015900.1 Flavonoid F3'H/CYP75B medium borderline
PHvul11G0015950.1 Flavonoid F3'H/CYP75B medium borderline
PHvul11G0015960.1 Flavonoid F3'H/CYP75B medium borderline
PHvul11G0015980.1 Flavonoid F3'H/CYP75B medium borderline
PHvul11G0017150.1 Flavonoid F3'H/CYP75B medium borderline
PHvulscaffold_11580000330.1 Flavonoid F3'H/CYP75B medium borderline
PHvulscaffold_170002440.1 Flavonoid F3'H/CYP75B medium borderline
PHvul01G0005550.1 Flavonoid F3H low borderline
PHvul01G0005570.1 Flavonoid F3H medium borderline
PHvul01G0006600.1 Flavonoid F3H medium borderline
PHvul01G0006660.1 Flavonoid F3H medium borderline
PHvul01G0012420.1 Flavonoid F3H low borderline
PHvul01G0012430.1 Flavonoid F3H low borderline
PHvul01G0012440.1 Flavonoid F3H low borderline
PHvul01G0012450.1 Flavonoid F3H low borderline
PHvul01G0018110.1 Flavonoid F3H medium borderline
PHvul01G0024200.1 Flavonoid F3H medium borderline
PHvul02G0004910.1 Flavonoid F3H medium borderline
PHvul02G0005650.1 Flavonoid F3H low borderline
PHvul02G0012010.1 Flavonoid F3H low borderline
PHvul02G0012010.2 Flavonoid F3H low borderline
PHvul02G0012020.1 Flavonoid F3H low borderline
PHvul02G0015000.1 Flavonoid F3H medium borderline
PHvul02G0015310.1 Flavonoid F3H medium borderline
PHvul02G0017310.1 Flavonoid F3H medium borderline
PHvul02G0017310.2 Flavonoid F3H medium borderline
PHvul02G0018200.1 Flavonoid F3H medium borderline
PHvul02G0018250.1 Flavonoid F3H medium borderline
PHvul02G0019130.1 Flavonoid F3H medium borderline
PHvul02G0020930.1 Flavonoid F3H medium borderline
PHvul02G0030310.1 Flavonoid F3H medium borderline
PHvul02G0032620.1 Flavonoid F3H medium borderline
PHvul02G0032620.2 Flavonoid F3H medium borderline
PHvul03G0001260.1 Flavonoid F3H medium borderline
PHvul03G0001270.1 Flavonoid F3H medium borderline
PHvul03G0001400.1 Flavonoid F3H medium borderline