PlantSME Plant secondary metabolism enzyme database

Polytrichastrum alpinum (polytrichastrum_alpinum)

Imported from atlas release summary for Polytrichastrum alpinum.

607
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 164 11 POD (61) View species results
Terpenoid pathway 137 17 BAHD (50) View species results
Alkaloid pathway 115 16 NMT (17) View species results
Rosmarinic acid pathway 83 7 C4H (37) View species results
Flavonoid pathway 78 7 UFGT (24) View species results
Steroid pathway 30 12 CAS (8) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 735 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 103 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
Palpscaffold_30069620 Rosmarinic Acid C4H medium pass
Palpscaffold_30077920 Rosmarinic Acid C4H medium pass
Palpscaffold_40080120 Rosmarinic Acid C4H low borderline
Palpscaffold_40080420 Rosmarinic Acid C4H low borderline
Palpscaffold_40080430 Rosmarinic Acid C4H low borderline
Palpscaffold_40080740 Rosmarinic Acid C4H low borderline
Palpscaffold_40082710 Rosmarinic Acid C4H low borderline
Palpscaffold_40089280 Rosmarinic Acid C4H low borderline
Palpscaffold_40089420 Rosmarinic Acid C4H low borderline
Palpscaffold_40089440 Rosmarinic Acid C4H low borderline
Palpscaffold_40089450 Rosmarinic Acid C4H low borderline
Palpscaffold_40091080 Rosmarinic Acid C4H low borderline
Palpscaffold_40096220 Rosmarinic Acid C4H low borderline
Palpscaffold_40096230 Rosmarinic Acid C4H low borderline
Palpscaffold_40099680 Rosmarinic Acid C4H medium pass
Palpscaffold_40099690 Rosmarinic Acid C4H medium pass
Palpscaffold_40099790 Rosmarinic Acid C4H low borderline
Palpscaffold_40101330 Rosmarinic Acid C4H low borderline
Palpscaffold_40101360 Rosmarinic Acid C4H low borderline
Palpscaffold_50103770 Rosmarinic Acid C4H low borderline
Palpscaffold_50104910 Rosmarinic Acid C4H medium pass
Palpscaffold_50106570 Rosmarinic Acid C4H low borderline
Palpscaffold_50116970 Rosmarinic Acid C4H low borderline
Palpscaffold_50119120 Rosmarinic Acid C4H medium pass
Palpscaffold_50125290 Rosmarinic Acid C4H low borderline
Palpscaffold_50126950 Rosmarinic Acid C4H low borderline
Palpscaffold_50129760 Rosmarinic Acid C4H medium pass
Palpscaffold_50130140 Rosmarinic Acid C4H low borderline
Palpscaffold_50131240 Rosmarinic Acid C4H low borderline
Palpscaffold_50135090 Rosmarinic Acid C4H low borderline
Palpscaffold_50136420 Rosmarinic Acid C4H low borderline
Palpscaffold_50138460 Rosmarinic Acid C4H medium pass
Palpscaffold_60149810 Rosmarinic Acid C4H low borderline
Palpscaffold_60150710 Rosmarinic Acid C4H medium pass
Palpscaffold_60150720 Rosmarinic Acid C4H medium pass
Palpscaffold_60150930 Rosmarinic Acid C4H medium pass
Palpscaffold_60150940 Rosmarinic Acid C4H medium pass
Palpscaffold_60151020 Rosmarinic Acid C4H low borderline
Palpscaffold_60151920 Rosmarinic Acid C4H low borderline
Palpscaffold_60154170 Rosmarinic Acid C4H low borderline
Palpscaffold_60154210 Rosmarinic Acid C4H low borderline
Palpscaffold_60154590 Rosmarinic Acid C4H low borderline
Palpscaffold_60158270 Rosmarinic Acid C4H low borderline
Palpscaffold_60158340 Rosmarinic Acid C4H low borderline
Palpscaffold_60158350 Rosmarinic Acid C4H low borderline
Palpscaffold_60160380 Rosmarinic Acid C4H low borderline
Palpscaffold_60160390 Rosmarinic Acid C4H low borderline
Palpscaffold_60160530 Rosmarinic Acid C4H low borderline
Palpscaffold_60166020 Rosmarinic Acid C4H medium pass
Palpscaffold_60166030 Rosmarinic Acid C4H low borderline