PlantSME Plant secondary metabolism enzyme database

Polytrichastrum alpinum (polytrichastrum_alpinum)

Imported from atlas release summary for Polytrichastrum alpinum.

859
Candidate Protein Records
607
Pathway-Level Records
1738
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 164 11 POD (61) View species results
Terpenoid pathway 137 17 BAHD (50) View species results
Alkaloid pathway 115 16 NMT (17) View species results
Rosmarinic acid pathway 83 7 C4H (37) View species results
Flavonoid pathway 78 7 UFGT (24) View species results
Steroid pathway 30 12 CAS (8) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 735 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 103 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Palpscaffold_10002560 Rosmarinic Acid 4CL medium pass
Palpscaffold_20032200 Rosmarinic Acid 4CL low borderline
Palpscaffold_30056130 Rosmarinic Acid 4CL low borderline
Palpscaffold_30062070 Rosmarinic Acid 4CL low borderline
Palpscaffold_30065610 Rosmarinic Acid 4CL low borderline
Palpscaffold_30066910 Rosmarinic Acid 4CL low borderline
Palpscaffold_30067350 Rosmarinic Acid 4CL low borderline
Palpscaffold_30067370 Rosmarinic Acid 4CL medium pass
Palpscaffold_30071890 Rosmarinic Acid 4CL medium pass
Palpscaffold_40100130 Rosmarinic Acid 4CL medium pass
Palpscaffold_50119260 Rosmarinic Acid 4CL low borderline
Palpscaffold_50134270 Rosmarinic Acid 4CL low borderline
Palpscaffold_50135140 Rosmarinic Acid 4CL low borderline
Palpscaffold_50141780 Rosmarinic Acid 4CL medium pass
Palpscaffold_50143840 Rosmarinic Acid 4CL low borderline
Palpscaffold_50144380 Rosmarinic Acid 4CL medium pass
Palpscaffold_50144910 Rosmarinic Acid 4CL low borderline
Palpscaffold_60153520 Rosmarinic Acid 4CL medium pass
Palpscaffold_60153880 Rosmarinic Acid 4CL low borderline
Palpscaffold_60155610 Rosmarinic Acid 4CL medium pass
Palpscaffold_60172170 Rosmarinic Acid 4CL medium pass
Palpscaffold_60176400 Rosmarinic Acid 4CL medium pass
Palpscaffold_70200850 Rosmarinic Acid 4CL low borderline
Palpscaffold_10009080 Rosmarinic Acid C4H low borderline
Palpscaffold_10019030 Rosmarinic Acid C4H low borderline
Palpscaffold_10019720 Rosmarinic Acid C4H medium pass
Palpscaffold_10019780 Rosmarinic Acid C4H medium pass
Palpscaffold_10020330 Rosmarinic Acid C4H low borderline
Palpscaffold_10021010 Rosmarinic Acid C4H low borderline
Palpscaffold_10022410 Rosmarinic Acid C4H low borderline
Palpscaffold_10022420 Rosmarinic Acid C4H low borderline
Palpscaffold_10022550 Rosmarinic Acid C4H low borderline
Palpscaffold_110029060 Rosmarinic Acid C4H low borderline
Palpscaffold_20034050 Rosmarinic Acid C4H low borderline
Palpscaffold_20034920 Rosmarinic Acid C4H low borderline
Palpscaffold_20035800 Rosmarinic Acid C4H medium pass
Palpscaffold_20036380 Rosmarinic Acid C4H low borderline
Palpscaffold_20038160 Rosmarinic Acid C4H low borderline
Palpscaffold_20040940 Rosmarinic Acid C4H medium pass
Palpscaffold_20043640 Rosmarinic Acid C4H low borderline
Palpscaffold_20044950 Rosmarinic Acid C4H low borderline
Palpscaffold_20044970 Rosmarinic Acid C4H low borderline
Palpscaffold_20045010 Rosmarinic Acid C4H low borderline
Palpscaffold_20045080 Rosmarinic Acid C4H medium pass
Palpscaffold_20045120 Rosmarinic Acid C4H medium pass
Palpscaffold_20045130 Rosmarinic Acid C4H low borderline
Palpscaffold_20045410 Rosmarinic Acid C4H medium pass
Palpscaffold_20045420 Rosmarinic Acid C4H low borderline
Palpscaffold_20045720 Rosmarinic Acid C4H medium pass
Palpscaffold_20052930 Rosmarinic Acid C4H low borderline