PlantSME Plant secondary metabolism enzyme database

Polytrichastrum alpinum (polytrichastrum_alpinum)

Imported from atlas release summary for Polytrichastrum alpinum.

859
Candidate Protein Records
607
Pathway-Level Records
1738
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 164 11 POD (61) View species results
Terpenoid pathway 137 17 BAHD (50) View species results
Alkaloid pathway 115 16 NMT (17) View species results
Rosmarinic acid pathway 83 7 C4H (37) View species results
Flavonoid pathway 78 7 UFGT (24) View species results
Steroid pathway 30 12 CAS (8) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 735 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 103 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Palpscaffold_60175980 Rosmarinic Acid C4H medium pass
Palpscaffold_60175990 Rosmarinic Acid C4H medium pass
Palpscaffold_70181710 Rosmarinic Acid C4H low borderline
Palpscaffold_70181730 Rosmarinic Acid C4H low borderline
Palpscaffold_70187100 Rosmarinic Acid C4H low borderline
Palpscaffold_70189450 Rosmarinic Acid C4H medium pass
Palpscaffold_70192130 Rosmarinic Acid C4H low borderline
Palpscaffold_70192480 Rosmarinic Acid C4H low borderline
Palpscaffold_70197560 Rosmarinic Acid C4H low borderline
Palpscaffold_70197760 Rosmarinic Acid C4H low borderline
Palpscaffold_70201370 Rosmarinic Acid C4H low borderline
Palpscaffold_70202810 Rosmarinic Acid C4H medium pass
Palpscaffold_70202870 Rosmarinic Acid C4H medium pass
Palpscaffold_70206650 Rosmarinic Acid C4H low borderline
Palpscaffold_70207110 Rosmarinic Acid C4H medium pass
Palpscaffold_70209000 Rosmarinic Acid C4H low borderline
Palpscaffold_70211920 Rosmarinic Acid C4H low borderline
Palpscaffold_70211940 Rosmarinic Acid C4H low borderline
Palpscaffold_70212060 Rosmarinic Acid C4H low borderline
Palpscaffold_70213150 Rosmarinic Acid C4H low borderline
Palpscaffold_80222530 Rosmarinic Acid C4H low borderline
Palpscaffold_30063670 Rosmarinic Acid CPR medium pass
Palpscaffold_30063680 Rosmarinic Acid CPR medium pass
Palpscaffold_40083570 Rosmarinic Acid CPR low borderline
Palpscaffold_50137560 Rosmarinic Acid CPR low borderline
Palpscaffold_50145550 Rosmarinic Acid CPR low borderline
Palpscaffold_60175630 Rosmarinic Acid CPR medium pass
Palpscaffold_40099760 Rosmarinic Acid HPPR medium pass
Palpscaffold_70199400 Rosmarinic Acid HPPR low borderline
Palpscaffold_10019440 Rosmarinic Acid PAL high pass
Palpscaffold_10025230 Rosmarinic Acid PAL high pass
Palpscaffold_10028160 Rosmarinic Acid PAL medium pass
Palpscaffold_10028170 Rosmarinic Acid PAL medium pass
Palpscaffold_20042470 Rosmarinic Acid PAL medium pass
Palpscaffold_20042480 Rosmarinic Acid PAL medium pass
Palpscaffold_20042530 Rosmarinic Acid PAL medium pass
Palpscaffold_20042540 Rosmarinic Acid PAL medium pass
Palpscaffold_20042560 Rosmarinic Acid PAL high pass
Palpscaffold_20043610 Rosmarinic Acid PAL medium pass
Palpscaffold_20043620 Rosmarinic Acid PAL high pass
Palpscaffold_20043630 Rosmarinic Acid PAL high pass
Palpscaffold_30061380 Rosmarinic Acid PAL medium pass
Palpscaffold_30065360 Rosmarinic Acid PAL low borderline
Palpscaffold_40082780 Rosmarinic Acid PAL medium pass
Palpscaffold_40082790 Rosmarinic Acid PAL medium pass
Palpscaffold_40082800 Rosmarinic Acid PAL medium pass
Palpscaffold_40083730 Rosmarinic Acid PAL medium pass
Palpscaffold_50133330 Rosmarinic Acid PAL high pass
Palpscaffold_50138140 Rosmarinic Acid PAL low borderline
Palpscaffold_60166470 Rosmarinic Acid PAL high pass