PlantSME Plant secondary metabolism enzyme database

Polytrichastrum alpinum (polytrichastrum_alpinum)

Imported from atlas release summary for Polytrichastrum alpinum.

859
Candidate Protein Records
607
Pathway-Level Records
1738
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 164 11 POD (61) View species results
Terpenoid pathway 137 17 BAHD (50) View species results
Alkaloid pathway 115 16 NMT (17) View species results
Rosmarinic acid pathway 83 7 C4H (37) View species results
Flavonoid pathway 78 7 UFGT (24) View species results
Steroid pathway 30 12 CAS (8) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 735 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 103 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Palpscaffold_60168550 Rosmarinic Acid PAL high pass
Palpscaffold_60168560 Rosmarinic Acid PAL high pass
Palpscaffold_70194740 Rosmarinic Acid PAL high pass
Palpscaffold_10015970 Rosmarinic Acid RAS medium pass
Palpscaffold_10016030 Rosmarinic Acid RAS medium pass
Palpscaffold_10021890 Rosmarinic Acid RAS medium pass
Palpscaffold_40088350 Rosmarinic Acid RAS medium pass
Palpscaffold_50124510 Rosmarinic Acid RAS low borderline
Palpscaffold_50128880 Rosmarinic Acid RAS low borderline
Palpscaffold_70180000 Rosmarinic Acid RAS medium pass
Palpscaffold_70183600 Rosmarinic Acid RAS medium pass
Palpscaffold_70184430 Rosmarinic Acid RAS low borderline
Palpscaffold_70184440 Rosmarinic Acid RAS medium pass
Palpscaffold_70196470 Rosmarinic Acid RAS medium pass
Palpscaffold_30071830 Rosmarinic Acid TAT low borderline
Palpscaffold_50128870 Rosmarinic Acid TAT low borderline
Palpscaffold_50130820 Rosmarinic Acid TAT medium pass
Palpscaffold_60161110 Rosmarinic Acid TAT medium pass
Palpscaffold_20044970 Steroid BR6OX1/CYP85A1 low borderline
Palpscaffold_20045410 Steroid BR6OX1/CYP85A1 low borderline
Palpscaffold_30077920 Steroid BR6OX1/CYP85A1 medium borderline
Palpscaffold_50124200 Steroid BR6OX1/CYP85A1 medium borderline
Palpscaffold_50129760 Steroid BR6OX1/CYP85A1 low borderline
Palpscaffold_50131240 Steroid BR6OX1/CYP85A1 medium borderline
Palpscaffold_50135090 Steroid BR6OX1/CYP85A1 medium borderline
Palpscaffold_60167990 Steroid BR6OX1/CYP85A1 medium borderline
Palpscaffold_60170180 Steroid BR6OX1/CYP85A1 low borderline
Palpscaffold_70187100 Steroid BR6OX1/CYP85A1 low borderline
Palpscaffold_70201370 Steroid BR6OX1/CYP85A1 medium borderline
Palpscaffold_10019720 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_20034920 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_20038160 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_20045120 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_30058310 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_30061940 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_30062100 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_30066890 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_30069530 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_40079920 Steroid BR6OX2/CYP85A2 medium borderline
Palpscaffold_40080420 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_40080740 Steroid BR6OX2/CYP85A2 medium borderline
Palpscaffold_40082710 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_40091080 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_40096220 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_40099790 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_40101360 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_50119120 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_50125290 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_60150710 Steroid BR6OX2/CYP85A2 low borderline
Palpscaffold_60150720 Steroid BR6OX2/CYP85A2 low borderline