PlantSME Plant secondary metabolism enzyme database

Polytrichastrum alpinum (polytrichastrum_alpinum)

Imported from atlas release summary for Polytrichastrum alpinum.

607
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 164 11 POD (61) View species results
Terpenoid pathway 137 17 BAHD (50) View species results
Alkaloid pathway 115 16 NMT (17) View species results
Rosmarinic acid pathway 83 7 C4H (37) View species results
Flavonoid pathway 78 7 UFGT (24) View species results
Steroid pathway 30 12 CAS (8) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 735 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 103 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Palpscaffold_40102800 Flavonoid F3H low borderline
Palpscaffold_50103930 Flavonoid F3H low borderline
Palpscaffold_50106650 Flavonoid F3H medium borderline
Palpscaffold_50107010 Flavonoid F3H medium borderline
Palpscaffold_50108600 Flavonoid F3H low borderline
Palpscaffold_50142930 Flavonoid F3H medium borderline
Palpscaffold_60155430 Flavonoid F3H medium borderline
Palpscaffold_60158970 Flavonoid F3H low borderline
Palpscaffold_60159890 Flavonoid F3H medium borderline
Palpscaffold_60161040 Flavonoid F3H medium borderline
Palpscaffold_60162550 Flavonoid F3H medium borderline
Palpscaffold_60162580 Flavonoid F3H medium borderline
Palpscaffold_60164820 Flavonoid F3H medium borderline
Palpscaffold_60165760 Flavonoid F3H low borderline
Palpscaffold_70180460 Flavonoid F3H medium borderline
Palpscaffold_70180530 Flavonoid F3H medium borderline
Palpscaffold_70180540 Flavonoid F3H medium pass
Palpscaffold_70181900 Flavonoid F3H low borderline
Palpscaffold_70184140 Flavonoid F3H medium borderline
Palpscaffold_70186440 Flavonoid F3H medium borderline
Palpscaffold_70202240 Flavonoid F3H low borderline
Palpscaffold_70213940 Flavonoid F3H medium borderline
Palpscaffold_70217190 Flavonoid F3H medium borderline
Palpscaffold_50108460 Flavonoid FLS medium borderline
Palpscaffold_70186510 Flavonoid FLS medium borderline
Palpscaffold_10006800 Flavonoid FNS medium borderline
Palpscaffold_10019030 Flavonoid FNS medium borderline
Palpscaffold_40089280 Flavonoid FNS medium borderline
Palpscaffold_40096220 Flavonoid FNS medium borderline
Palpscaffold_40096230 Flavonoid FNS medium borderline
Palpscaffold_50131240 Flavonoid FNS medium borderline
Palpscaffold_60148680 Flavonoid FNS low borderline
Palpscaffold_60151020 Flavonoid FNS medium borderline
Palpscaffold_60154200 Flavonoid FNS medium borderline
Palpscaffold_60154210 Flavonoid FNS medium borderline
Palpscaffold_60160390 Flavonoid FNS low borderline
Palpscaffold_70209000 Flavonoid FNS medium borderline
Palpscaffold_10000930 Flavonoid IFR low borderline
Palpscaffold_10007970 Flavonoid IFR low borderline
Palpscaffold_10010260 Flavonoid IFR medium pass
Palpscaffold_20037840 Flavonoid IFR medium pass
Palpscaffold_20048370 Flavonoid IFR low borderline
Palpscaffold_30066970 Flavonoid IFR low borderline
Palpscaffold_30072950 Flavonoid IFR low borderline
Palpscaffold_30074240 Flavonoid IFR low borderline
Palpscaffold_30077950 Flavonoid IFR low borderline
Palpscaffold_40079850 Flavonoid IFR low borderline
Palpscaffold_40083970 Flavonoid IFR low borderline
Palpscaffold_50106810 Flavonoid IFR low borderline
Palpscaffold_50109630 Flavonoid IFR low borderline