PlantSME Plant secondary metabolism enzyme database

Polytrichastrum alpinum (polytrichastrum_alpinum)

Imported from atlas release summary for Polytrichastrum alpinum.

859
Candidate Protein Records
607
Pathway-Level Records
1738
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 164 11 POD (61) View species results
Terpenoid pathway 137 17 BAHD (50) View species results
Alkaloid pathway 115 16 NMT (17) View species results
Rosmarinic acid pathway 83 7 C4H (37) View species results
Flavonoid pathway 78 7 UFGT (24) View species results
Steroid pathway 30 12 CAS (8) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 735 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 103 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Palpscaffold_50111520 Flavonoid IFS low borderline
Palpscaffold_50119120 Flavonoid IFS medium borderline
Palpscaffold_50124200 Flavonoid IFS low borderline
Palpscaffold_50125290 Flavonoid IFS medium borderline
Palpscaffold_50131190 Flavonoid IFS low borderline
Palpscaffold_50135090 Flavonoid IFS medium borderline
Palpscaffold_50136420 Flavonoid IFS low borderline
Palpscaffold_50139500 Flavonoid IFS low borderline
Palpscaffold_60158340 Flavonoid IFS low borderline
Palpscaffold_60158350 Flavonoid IFS low borderline
Palpscaffold_60160530 Flavonoid IFS medium borderline
Palpscaffold_60166020 Flavonoid IFS medium borderline
Palpscaffold_60166030 Flavonoid IFS low borderline
Palpscaffold_60167990 Flavonoid IFS medium borderline
Palpscaffold_60168130 Flavonoid IFS medium borderline
Palpscaffold_60173130 Flavonoid IFS low borderline
Palpscaffold_60173330 Flavonoid IFS low borderline
Palpscaffold_60173860 Flavonoid IFS low borderline
Palpscaffold_60175950 Flavonoid IFS medium borderline
Palpscaffold_60175970 Flavonoid IFS medium borderline
Palpscaffold_60175980 Flavonoid IFS medium borderline
Palpscaffold_60175990 Flavonoid IFS medium borderline
Palpscaffold_70181710 Flavonoid IFS low borderline
Palpscaffold_70181730 Flavonoid IFS low borderline
Palpscaffold_70189450 Flavonoid IFS medium borderline
Palpscaffold_70197760 Flavonoid IFS medium borderline
Palpscaffold_70201370 Flavonoid IFS medium borderline
Palpscaffold_70202870 Flavonoid IFS medium borderline
Palpscaffold_70204640 Flavonoid IFS low borderline
Palpscaffold_70211920 Flavonoid IFS medium borderline
Palpscaffold_10019440 Flavonoid PAL high pass
Palpscaffold_10025230 Flavonoid PAL high pass
Palpscaffold_10028160 Flavonoid PAL medium pass
Palpscaffold_10028170 Flavonoid PAL medium pass
Palpscaffold_20042470 Flavonoid PAL medium pass
Palpscaffold_20042480 Flavonoid PAL medium pass
Palpscaffold_20042530 Flavonoid PAL medium pass
Palpscaffold_20042540 Flavonoid PAL medium pass
Palpscaffold_20042560 Flavonoid PAL high pass
Palpscaffold_20043610 Flavonoid PAL medium pass
Palpscaffold_20043620 Flavonoid PAL high pass
Palpscaffold_20043630 Flavonoid PAL high pass
Palpscaffold_30061380 Flavonoid PAL medium pass
Palpscaffold_30065360 Flavonoid PAL low borderline
Palpscaffold_40082780 Flavonoid PAL medium pass
Palpscaffold_40082790 Flavonoid PAL medium pass
Palpscaffold_40082800 Flavonoid PAL medium pass
Palpscaffold_40083730 Flavonoid PAL medium pass
Palpscaffold_50133330 Flavonoid PAL high pass
Palpscaffold_50138140 Flavonoid PAL low borderline