PlantSME Plant secondary metabolism enzyme database

Polytrichastrum alpinum (polytrichastrum_alpinum)

Imported from atlas release summary for Polytrichastrum alpinum.

859
Candidate Protein Records
607
Pathway-Level Records
1738
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 164 11 POD (61) View species results
Terpenoid pathway 137 17 BAHD (50) View species results
Alkaloid pathway 115 16 NMT (17) View species results
Rosmarinic acid pathway 83 7 C4H (37) View species results
Flavonoid pathway 78 7 UFGT (24) View species results
Steroid pathway 30 12 CAS (8) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 735 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 103 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Palpscaffold_50123060 Alkaloid STR low borderline
Palpscaffold_50126560 Alkaloid STR low borderline
Palpscaffold_50133250 Alkaloid STR low borderline
Palpscaffold_50136340 Alkaloid STR low borderline
Palpscaffold_50136430 Alkaloid STR medium pass
Palpscaffold_50142750 Alkaloid STR medium pass
Palpscaffold_60175330 Alkaloid STR low borderline
Palpscaffold_60176210 Alkaloid STR medium pass
Palpscaffold_70180240 Alkaloid STR low borderline
Palpscaffold_70180500 Alkaloid STR low borderline
Palpscaffold_70181410 Alkaloid STR medium pass
Palpscaffold_70204100 Alkaloid STR low borderline
Palpscaffold_70207670 Alkaloid STR low borderline
Palpscaffold_70207760 Alkaloid STR medium pass
Palpscaffold_70208110 Alkaloid STR medium pass
Palpscaffold_70209250 Alkaloid STR low borderline
Palpscaffold_70209870 Alkaloid STR low borderline
Palpscaffold_70214280 Alkaloid STR medium pass
Palpscaffold_10006800 Alkaloid T16H medium borderline
Palpscaffold_10015710 Alkaloid T16H low borderline
Palpscaffold_20045010 Alkaloid T16H medium borderline
Palpscaffold_30069620 Alkaloid T16H medium borderline
Palpscaffold_40080740 Alkaloid T16H medium borderline
Palpscaffold_40089280 Alkaloid T16H medium pass
Palpscaffold_40091080 Alkaloid T16H medium borderline
Palpscaffold_50126950 Alkaloid T16H medium borderline
Palpscaffold_50131190 Alkaloid T16H low borderline
Palpscaffold_60150710 Alkaloid T16H medium borderline
Palpscaffold_60150720 Alkaloid T16H medium borderline
Palpscaffold_60150940 Alkaloid T16H medium borderline
Palpscaffold_60166030 Alkaloid T16H low borderline
Palpscaffold_70189450 Alkaloid T16H medium borderline
Palpscaffold_70197560 Alkaloid T16H medium borderline
Palpscaffold_70201370 Alkaloid T16H medium borderline
Palpscaffold_70206650 Alkaloid T16H medium borderline
Palpscaffold_70207110 Alkaloid T16H medium borderline
Palpscaffold_70211920 Alkaloid T16H medium borderline
Palpscaffold_70213150 Alkaloid T16H medium borderline
Palpscaffold_10019720 Alkaloid T3O medium borderline
Palpscaffold_10019780 Alkaloid T3O medium borderline
Palpscaffold_10020330 Alkaloid T3O medium pass
Palpscaffold_20036760 Alkaloid T3O medium pass
Palpscaffold_20043640 Alkaloid T3O medium borderline
Palpscaffold_20045080 Alkaloid T3O medium borderline
Palpscaffold_20045410 Alkaloid T3O medium borderline
Palpscaffold_20045720 Alkaloid T3O medium borderline
Palpscaffold_30058310 Alkaloid T3O medium borderline
Palpscaffold_30060290 Alkaloid T3O medium borderline
Palpscaffold_30066180 Alkaloid T3O low borderline
Palpscaffold_30069530 Alkaloid T3O medium borderline