PlantSME Plant secondary metabolism enzyme database

Populus tremuloides (populus_tremuloides)

Imported from atlas release summary for Populus tremuloides.

1603
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 465 19 BAHD (191) View species results
Phenylpropanoid pathway 358 13 POD (140) View species results
Alkaloid pathway 347 21 7DLGT (59) View species results
Flavonoid pathway 205 11 UFGT (115) View species results
Rosmarinic acid pathway 130 7 C4H (39) View species results
Steroid pathway 98 14 CAS (35) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1353 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 305 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
PtremuloPotrs0063710110470.1.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs0066080113340.1.v1.427 Flavonoid F3H low borderline
PtremuloPotrs0067520115810.1.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs0068930117810.2.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs0075640127800.1.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs0077740132750.1.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs0077740132760.1.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs0078520134920.1.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs0078700135520.1.v1.427 Flavonoid F3H low borderline
PtremuloPotrs0084230150100.1.v1.427 Flavonoid F3H low borderline
PtremuloPotrs0084460150730.1.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs0085060152260.1.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs0085090152310.1.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs0087100158070.1.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs0087160158310.1.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs0088150160880.1.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs0088680163080.1.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs0088860163700.1.v1.427 Flavonoid F3H medium pass
PtremuloPotrs0090280168500.1.v1.427 Flavonoid F3H low borderline
PtremuloPotrs0092830179840.2.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs0094770181720.1.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs0094770181730.1.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs0095890182610.1.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs0096760183420.1.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs0108760196610.1.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs0109970198270.1.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs0110770199410.1.v1.427 Flavonoid F3H low borderline
PtremuloPotrs0112930202350.1.v1.427 Flavonoid F3H low borderline
PtremuloPotrs0113260202990.1.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs0120050208170.2.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs0121110208890.1.v1.427 Flavonoid F3H low borderline
PtremuloPotrs0124800211690.1.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs0126620213050.1.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs0131440216640.1.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs0135440219530.1.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs0146400227090.1.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs0148800228570.1.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs0157960234390.2.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs0158030234460.1.v1.427 Flavonoid F3H low borderline
PtremuloPotrs0158030234470.2.v1.427 Flavonoid F3H low borderline
PtremuloPotrs0158130234610.1.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs0167820241670.1.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs0190530266280.1.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs0193610271490.1.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs0196020276140.1.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs0196550277110.1.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs0198730281060.1.v1.427 Flavonoid F3H low borderline
PtremuloPotrs0200370285550.1.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs0201600289110.1.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs0309500296760.1.v1.427 Flavonoid F3H low borderline