PlantSME Plant secondary metabolism enzyme database

Populus tremuloides (populus_tremuloides)

Imported from atlas release summary for Populus tremuloides.

1603
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 465 19 BAHD (191) View species results
Phenylpropanoid pathway 358 13 POD (140) View species results
Alkaloid pathway 347 21 7DLGT (59) View species results
Flavonoid pathway 205 11 UFGT (115) View species results
Rosmarinic acid pathway 130 7 C4H (39) View species results
Steroid pathway 98 14 CAS (35) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1353 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 305 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
PtremuloPotrs0335140300410.1.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs0338620301140.1.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs0348690303260.1.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs0359380305630.1.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs0361770306500.1.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs0363570306920.1.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs0378840311800.2.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs0380280312340.1.v1.427 Flavonoid F3H low borderline
PtremuloPotrs0385770314750.1.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs0397720320710.1.v1.427 Flavonoid F3H medium pass
PtremuloPotrs0402120323410.1.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs0410890329030.1.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs0421470336810.2.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs0425940340420.1.v1.427 Flavonoid F3H low borderline
PtremuloPotrs0427540341960.1.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs0428370342650.1.v1.427 Flavonoid F3H medium pass
PtremuloPotrs1459680351110.1.v1.427 Flavonoid F3H medium borderline
PtremuloPotrs1474970353020.1.v1.427 Flavonoid F3H low borderline
PtremuloPotrs0006340012560.2.v1.427 Flavonoid FNS low borderline
PtremuloPotrs0030660058850.1.v1.427 Flavonoid FNS low borderline
PtremuloPotrs0035960067390.1.v1.427 Flavonoid FNS medium borderline
PtremuloPotrs0037370069540.1.v1.427 Flavonoid FNS medium borderline
PtremuloPotrs0046480083710.1.v1.427 Flavonoid FNS medium borderline
PtremuloPotrs0054680096220.1.v1.427 Flavonoid FNS medium borderline
PtremuloPotrs0069130118100.1.v1.427 Flavonoid FNS medium borderline
PtremuloPotrs0074760126660.1.v1.427 Flavonoid FNS medium borderline
PtremuloPotrs0083730148700.1.v1.427 Flavonoid FNS medium borderline
PtremuloPotrs0085620153810.1.v1.427 Flavonoid FNS low borderline
PtremuloPotrs0087160158300.1.v1.427 Flavonoid FNS low borderline
PtremuloPotrs0087990160350.1.v1.427 Flavonoid FNS medium borderline
PtremuloPotrs0088640162890.1.v1.427 Flavonoid FNS medium borderline
PtremuloPotrs0090090167920.1.v1.427 Flavonoid FNS medium pass
PtremuloPotrs0090880170460.1.v1.427 Flavonoid FNS medium borderline
PtremuloPotrs0106220193060.1.v1.427 Flavonoid FNS medium borderline
PtremuloPotrs0113290203030.1.v1.427 Flavonoid FNS medium borderline
PtremuloPotrs0122350209740.1.v1.427 Flavonoid FNS low borderline
PtremuloPotrs0128190214250.1.v1.427 Flavonoid FNS medium borderline
PtremuloPotrs0128190214260.1.v1.427 Flavonoid FNS medium borderline
PtremuloPotrs0133240217780.1.v1.427 Flavonoid FNS medium borderline
PtremuloPotrs0133240217830.1.v1.427 Flavonoid FNS low borderline
PtremuloPotrs0137750221180.1.v1.427 Flavonoid FNS medium borderline
PtremuloPotrs0321900298290.1.v1.427 Flavonoid FNS medium borderline
PtremuloPotrs0008190016260.1.v1.427 Flavonoid IFR high pass
PtremuloPotrs0011500024360.1.v1.427 Flavonoid IFR medium pass
PtremuloPotrs0024740050390.1.v1.427 Flavonoid IFR low borderline
PtremuloPotrs0031990060910.1.v1.427 Flavonoid IFR high pass
PtremuloPotrs0034350064710.1.v1.427 Flavonoid IFR medium pass
PtremuloPotrs0045820082680.1.v1.427 Flavonoid IFR low borderline
PtremuloPotrs0054580096060.1.v1.427 Flavonoid IFR low borderline
PtremuloPotrs0059620103670.1.v1.427 Flavonoid IFR high pass