PlantSME Plant secondary metabolism enzyme database

Prunus avium (prunus_avium)

Imported from atlas release summary for Prunus avium.

1762
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 577 18 UGT (221) View species results
Alkaloid pathway 425 26 7DLGT (113) View species results
Phenylpropanoid pathway 315 12 POD (100) View species results
Flavonoid pathway 212 15 UFGT (141) View species results
Rosmarinic acid pathway 158 7 C4H (57) View species results
Steroid pathway 75 13 CAS (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1551 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 337 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
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Gene Pathway Family Confidence Status Best Target
Pav_sc0000491.1_g040.1.mk:mrna Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pav_sc0000491.1_g450.1.mk:mrna Phenylpropanoid 4CL low borderline 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Pav_sc0000598.1_g610.1.mk:CDS:1 Phenylpropanoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Pav_sc0000599.1_g090.1.mk:mrna Phenylpropanoid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Pav_sc0000636.1_g260.1.mk:mrna Phenylpropanoid 4CL medium pass 4CL__00018__sp_Q9S777_4CL3_ARATH
Pav_sc0000700.1_g230.1.mk:mrna Phenylpropanoid 4CL low borderline 4CL__00006__sp_P17814_4CL1_ORYSJ
Pav_sc0000754.1_g730.1.mk:mrna Phenylpropanoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Pav_sc0000762.1_g110.1.mk:mrna Phenylpropanoid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
Pav_sc0000863.1_g410.1.mk:mrna Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pav_sc0001014.1_g030.1.mk:mrna Phenylpropanoid 4CL low borderline 4CL__00001__sp_I3PB36_CNL_PETHY
Pav_sc0001080.1_g050.1.mk:mrna Phenylpropanoid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
Pav_sc0001124.1_g410.1.mk:mrna Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pav_sc0001275.1_g220.1.mk:CDS:1 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pav_sc0001710.1_g1400.1.mk:mrna Phenylpropanoid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
Pav_sc0001983.1_g030.1.mk:mrna Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pav_sc0001983.1_g050.1.br:CDS:1 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pav_sc0001983.1_g110.1.mk:mrna Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pav_sc0002960.1_g080.1.mk:mrna Phenylpropanoid 4CL medium pass 4CL__00006__sp_P17814_4CL1_ORYSJ
Pav_sc0003169.1_g160.1.mk:mrna Phenylpropanoid 4CL low borderline 4CL__00003__sp_M4ISH0_CCL1_HUMLU
Pav_sc0003292.1_g030.1.mk:mrna Phenylpropanoid 4CL low borderline 4CL__00006__sp_P17814_4CL1_ORYSJ
Pav_sc0004687.1_g050.1.mk:mrna Phenylpropanoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
Pav_sc0006281.1_g050.1.mk:mrna Phenylpropanoid 4CL medium pass 4CL__00004__sp_O24146_4CL2_TOBAC
Pav_sc0000071.1_g120.1.mk:mrna Rosmarinic Acid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Pav_sc0000091.1_g340.1.mk:mrna Rosmarinic Acid 4CL medium pass 4CL__00009__sp_Q67W82_4CL4_ORYSJ
Pav_sc0000127.1_g160.1.mk:CDS:1 Rosmarinic Acid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
Pav_sc0000157.1_g950.1.mk:mrna Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Pav_sc0000195.1_g940.1.mk:mrna Rosmarinic Acid 4CL low borderline 4CL__00003__sp_M4ISH0_CCL1_HUMLU
Pav_sc0000351.1_g340.1.mk:mrna Rosmarinic Acid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
Pav_sc0000359.1_g100.1.mk:mrna Rosmarinic Acid 4CL medium pass 4CL__00003__sp_M4ISH0_CCL1_HUMLU
Pav_sc0000367.1_g080.1.mk:mrna Rosmarinic Acid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
Pav_sc0000414.1_g020.1.mk:mrna Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pav_sc0000414.1_g030.1.mk:mrna Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pav_sc0000415.1_g050.1.mk:mrna Rosmarinic Acid 4CL low borderline 4CL__00006__sp_P17814_4CL1_ORYSJ
Pav_sc0000415.1_g220.1.mk:mrna Rosmarinic Acid 4CL low borderline 4CL__00006__sp_P17814_4CL1_ORYSJ
Pav_sc0000480.1_g840.1.mk:mrna Rosmarinic Acid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Pav_sc0000481.1_g040.1.mk:mrna Rosmarinic Acid 4CL low borderline 4CL__00017__sp_Q9S725_4CL2_ARATH
Pav_sc0000491.1_g040.1.mk:mrna Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pav_sc0000491.1_g450.1.mk:mrna Rosmarinic Acid 4CL low borderline 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Pav_sc0000598.1_g610.1.mk:CDS:1 Rosmarinic Acid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Pav_sc0000599.1_g090.1.mk:mrna Rosmarinic Acid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Pav_sc0000636.1_g260.1.mk:mrna Rosmarinic Acid 4CL medium pass 4CL__00018__sp_Q9S777_4CL3_ARATH
Pav_sc0000700.1_g230.1.mk:mrna Rosmarinic Acid 4CL low borderline 4CL__00006__sp_P17814_4CL1_ORYSJ
Pav_sc0000754.1_g730.1.mk:mrna Rosmarinic Acid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Pav_sc0000762.1_g110.1.mk:mrna Rosmarinic Acid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
Pav_sc0000863.1_g410.1.mk:mrna Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pav_sc0001014.1_g030.1.mk:mrna Rosmarinic Acid 4CL low borderline 4CL__00001__sp_I3PB36_CNL_PETHY
Pav_sc0001080.1_g050.1.mk:mrna Rosmarinic Acid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
Pav_sc0001124.1_g410.1.mk:mrna Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pav_sc0001275.1_g220.1.mk:CDS:1 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pav_sc0001710.1_g1400.1.mk:mrna Rosmarinic Acid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH