PlantSME Plant secondary metabolism enzyme database

Prunus avium (prunus_avium)

Imported from atlas release summary for Prunus avium.

1762
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 577 18 UGT (221) View species results
Alkaloid pathway 425 26 7DLGT (113) View species results
Phenylpropanoid pathway 315 12 POD (100) View species results
Flavonoid pathway 212 15 UFGT (141) View species results
Rosmarinic acid pathway 158 7 C4H (57) View species results
Steroid pathway 75 13 CAS (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1551 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 337 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAD
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Gene Pathway Family Confidence Status Best Target
Pav_co4007079.1_g010.1.br:mrna Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
Pav_co4012911.1_g010.1.br:mrna Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pav_sc0000009.1_g450.1.br:mrna Phenylpropanoid CAD low borderline CAD__00010__sp_P48523_CADH4_ARATH
Pav_sc0000009.1_g480.1.br:mrna Phenylpropanoid CAD low borderline CAD__00014__sp_Q2KNL5_CADH1_OCIBA
Pav_sc0000009.1_g490.1.br:mrna Phenylpropanoid CAD low borderline CAD__00008__sp_O49482_CADH5_ARATH
Pav_sc0000009.1_g500.1.br:mrna Phenylpropanoid CAD low borderline CAD__00008__sp_O49482_CADH5_ARATH
Pav_sc0000009.1_g510.1.br:mrna Phenylpropanoid CAD low borderline CAD__00008__sp_O49482_CADH5_ARATH
Pav_sc0000009.1_g530.1.mk:mrna Phenylpropanoid CAD low borderline CAD__00008__sp_O49482_CADH5_ARATH
Pav_sc0000009.1_g590.1.br:mrna Phenylpropanoid CAD low borderline CAD__00014__sp_Q2KNL5_CADH1_OCIBA
Pav_sc0000085.1_g190.1.mk:mrna Phenylpropanoid CAD medium pass CAD__00009__sp_P42734_CADH9_ARATH
Pav_sc0000269.1_g010.1.br:mrna Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pav_sc0000333.1_g240.1.mk:mrna Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pav_sc0000354.1_g480.1.mk:mrna Phenylpropanoid CAD low borderline CAD__00008__sp_O49482_CADH5_ARATH
Pav_sc0000376.1_g800.1.mk:mrna Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
Pav_sc0000398.1_g280.1.mk:mrna Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
Pav_sc0000398.1_g410.1.br:mrna Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pav_sc0000407.1_g210.1.mk:mrna Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
Pav_sc0000441.1_g090.1.br:mrna Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pav_sc0000441.1_g100.1.br:mrna Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pav_sc0000463.1_g010.1.br:mrna Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
Pav_sc0000488.1_g260.1.mk:mrna Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
Pav_sc0000488.1_g270.1.mk:mrna Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
Pav_sc0000488.1_g370.1.br:mrna Phenylpropanoid CAD low borderline CAD__00016__sp_Q9SJ10_CADH3_ARATH
Pav_sc0000488.1_g400.1.mk:CDS:1 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
Pav_sc0000558.1_g440.1.mk:mrna Phenylpropanoid CAD low borderline CAD__00004__sp_B5LAT8_CAD1_CAPAN
Pav_sc0000562.1_g130.1.mk:mrna Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pav_sc0000589.1_g240.1.mk:mrna Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
Pav_sc0000589.1_g250.1.mk:mrna Phenylpropanoid CAD low borderline CAD__00011__sp_Q02971_CADH7_ARATH
Pav_sc0000625.1_g120.1.mk:mrna Phenylpropanoid CAD medium pass CAD__00014__sp_Q2KNL5_CADH1_OCIBA
Pav_sc0000636.1_g510.1.mk:mrna Phenylpropanoid CAD low borderline CAD__00003__sp_A0A2P1GIW4_REDX1_CATRO
Pav_sc0000638.1_g1090.1.mk:mrna Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
Pav_sc0000652.1_g840.1.mk:mrna Phenylpropanoid CAD low borderline CAD__00011__sp_Q02971_CADH7_ARATH
Pav_sc0000736.1_g210.1.mk:mrna Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pav_sc0000736.1_g550.1.mk:mrna Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pav_sc0000764.1_g380.1.mk:mrna Phenylpropanoid CAD low borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
Pav_sc0000888.1_g250.1.mk:mrna Phenylpropanoid CAD low borderline CAD__00012__sp_Q02972_CADH8_ARATH
Pav_sc0000990.1_g010.1.mk:mrna Phenylpropanoid CAD medium pass CAD__00009__sp_P42734_CADH9_ARATH
Pav_sc0001545.1_g010.1.mk:mrna Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pav_sc0001545.1_g060.1.mk:mrna Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pav_sc0001545.1_g080.1.mk:mrna Phenylpropanoid CAD low borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
Pav_sc0001770.1_g020.1.br:mrna Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pav_sc0001807.1_g100.1.mk:mrna Phenylpropanoid CAD medium pass CAD__00007__sp_O24562_CADH_MAIZE
Pav_sc0001936.1_g050.1.mk:mrna Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pav_sc0002348.1_g010.1.br:mrna Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
Pav_sc0002348.1_g020.1.br:mrna Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
Pav_sc0002348.1_g030.1.br:mrna Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
Pav_sc0002348.1_g040.1.br:mrna Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
Pav_sc0002348.1_g060.1.br:mrna Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
Pav_sc0002348.1_g070.1.mk:mrna Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
Pav_sc0002348.1_g080.1.br:mrna Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE