Prunus avium (prunus_avium)
Imported from atlas release summary for Prunus avium.
1762
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1762
Candidate Genes
C4H
7.03%
BAHD
5.97%
UGT
5.8%
C3'H/CYP98A
5.49%
7DLGT
4.31%
CYP76
4.12%
IFS
4.04%
UFGT
3.92%
Other Families
59.33%
More Families (96)
POD
119
2.86%
T3O
118
2.84%
F3H
113
2.72%
4CL
108
2.6%
DWF4/CYP90B1
86
2.07%
NMT
76
1.83%
CAD
75
1.81%
H6H
73
1.76%
STR
64
1.54%
CODM/T6ODM
61
1.47%
F3'H/CYP75B
61
1.47%
BR6OX2/CYP85A2
61
1.47%
SGD
58
1.4%
HCT
56
1.35%
GS
55
1.32%
TAT
53
1.28%
TPS
51
1.23%
G8O/G8H
49
1.18%
T16H
48
1.16%
GES
44
1.06%
CAS
43
1.03%
CSE
42
1.01%
LAC
41
0.99%
CYP71
38
0.91%
TRI/TRII
37
0.89%
BBE
37
0.89%
FNS
36
0.87%
CYP90D1
36
0.87%
COMT
35
0.84%
IO
33
0.79%
7DLH
33
0.79%
RAS
33
0.79%
SMT1/SMT2/SMT3
32
0.77%
CCR
28
0.67%
NCS
27
0.65%
ANR
26
0.63%
IFR
26
0.63%
PMT
24
0.58%
F3'5'H/CYP75A
23
0.55%
BR6OX1/CYP85A1
22
0.53%
16OMT
21
0.51%
LAMT
21
0.51%
F5H/CYP84A
21
0.51%
PYKS
18
0.43%
DFR
18
0.43%
CPD/CYP90A1
16
0.39%
COR
15
0.36%
SLS
14
0.34%
8HGO
14
0.34%
ANS/LDOX
12
0.29%
DWF7
12
0.29%
CCoAOMT
11
0.26%
CYP51G1
11
0.26%
ROT3/CYP90C1
10
0.24%
ISY
9
0.22%
PAL
9
0.22%
SQE
9
0.22%
MPO
8
0.19%
6OMT_4OMT_SOMT
7
0.17%
CNMT
7
0.17%
CYP80B1
7
0.17%
TYDC_DDC
6
0.14%
CHS
6
0.14%
FLS
6
0.14%
CPR
6
0.14%
AACT
6
0.14%
FPPS
6
0.14%
HPPR
5
0.12%
GGPPS
5
0.12%
ODC
4
0.1%
XMT_MXMT_DXMT
4
0.1%
CHI
4
0.1%
DET2
4
0.1%
SQS/FDFT1
4
0.1%
HMGR
4
0.1%
DXS
4
0.1%
CYP719
3
0.07%
SMO1/SMO2
3
0.07%
MVD
3
0.07%
MVK
3
0.07%
PMK
3
0.07%
MCT/IspD
3
0.07%
CYP80F1
2
0.05%
TDC
2
0.05%
HYD1
2
0.05%
DWF5
2
0.05%
FK
2
0.05%
DXR
2
0.05%
HDR/IspH
2
0.05%
MDS/IspF
2
0.05%
ADC
1
0.02%
CPI1
1
0.02%
DWF1
1
0.02%
HMGS
1
0.02%
CMK/IspE
1
0.02%
IDI
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 577 | 18 | UGT (221) | View species results |
| Alkaloid pathway | 425 | 26 | 7DLGT (113) | View species results |
| Phenylpropanoid pathway | 315 | 12 | POD (100) | View species results |
| Flavonoid pathway | 212 | 15 | UFGT (141) | View species results |
| Rosmarinic acid pathway | 158 | 7 | C4H (57) | View species results |
| Steroid pathway | 75 | 13 | CAS (34) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1551 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 337 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP76
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Pav_sc0000890.1_g1220.1.br:mrna | Terpenoid | CYP76 | medium | pass | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Pav_sc0000890.1_g1250.1.mk:mrna | Terpenoid | CYP76 | medium | pass | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| Pav_sc0000935.1_g070.1.mk:mrna | Terpenoid | CYP76 | low | borderline | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| Pav_sc0001059.1_g240.1.mk:CDS:1 | Terpenoid | CYP76 | medium | pass | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| Pav_sc0001077.1_g400.1.mk:mrna | Terpenoid | CYP76 | low | borderline | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| Pav_sc0001134.1_g190.1.mk:mrna | Terpenoid | CYP76 | medium | pass | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Pav_sc0001196.1_g1060.1.mk:mrna | Terpenoid | CYP76 | medium | pass | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| Pav_sc0001196.1_g1070.1.br:mrna | Terpenoid | CYP76 | medium | pass | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| Pav_sc0001196.1_g1100.1.mk:mrna | Terpenoid | CYP76 | medium | borderline | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| Pav_sc0001405.1_g1130.1.mk:mrna | Terpenoid | CYP76 | low | borderline | CYP76__00016__sp_P0DXJ6_C7631_LOPWI |
| Pav_sc0001412.1_g160.1.br:CDS:1 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Pav_sc0001412.1_g170.1.mk:mrna | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Pav_sc0001412.1_g190.1.br:CDS:1 | Terpenoid | CYP76 | medium | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| Pav_sc0001412.1_g200.1.br:mrna | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Pav_sc0001412.1_g210.1.mk:mrna | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Pav_sc0001412.1_g230.1.br:CDS:1 | Terpenoid | CYP76 | medium | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| Pav_sc0001540.1_g130.1.mk:mrna | Terpenoid | CYP76 | low | borderline | CYP76__00002__sp_A0A0C5QRZ2_C76H2_SALFT |
| Pav_sc0001554.1_g040.1.mk:mrna | Terpenoid | CYP76 | low | borderline | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |
| Pav_sc0001580.1_g300.1.mk:mrna | Terpenoid | CYP76 | medium | borderline | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| Pav_sc0001582.1_g440.1.br:mrna | Terpenoid | CYP76 | low | borderline | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| Pav_sc0001710.1_g1370.1.mk:mrna | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Pav_sc0001747.1_g110.1.mk:CDS:1 | Terpenoid | CYP76 | medium | borderline | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| Pav_sc0001769.1_g210.1.br:CDS:1 | Terpenoid | CYP76 | medium | pass | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| Pav_sc0001770.1_g060.1.br:CDS:1 | Terpenoid | CYP76 | medium | borderline | CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU |
| Pav_sc0001781.1_g140.1.mk:mrna | Terpenoid | CYP76 | medium | pass | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Pav_sc0001851.1_g160.1.br:mrna | Terpenoid | CYP76 | low | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| Pav_sc0001851.1_g200.1.mk:mrna | Terpenoid | CYP76 | medium | pass | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| Pav_sc0001851.1_g250.1.mk:CDS:1 | Terpenoid | CYP76 | medium | pass | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| Pav_sc0001851.1_g260.1.br:CDS:1 | Terpenoid | CYP76 | medium | pass | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| Pav_sc0001922.1_g030.1.br:mrna | Terpenoid | CYP76 | medium | pass | CYP76__00003__sp_A0A0S1TPC7_C76K6_SALPM |
| Pav_sc0002207.1_g550.1.br:CDS:1 | Terpenoid | CYP76 | medium | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| Pav_sc0002208.1_g780.1.mk:mrna | Terpenoid | CYP76 | low | borderline | CYP76__00008__sp_A0A1D8QMG4_C76K8_ROSOF |
| Pav_sc0002230.1_g050.1.mk:mrna | Terpenoid | CYP76 | medium | pass | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Pav_sc0002230.1_g060.1.br:mrna | Terpenoid | CYP76 | medium | pass | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| Pav_sc0002230.1_g070.1.mk:mrna | Terpenoid | CYP76 | medium | pass | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| Pav_sc0002230.1_g130.1.br:mrna | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Pav_sc0002230.1_g140.1.br:CDS:1 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Pav_sc0002287.1_g100.1.br:mrna | Terpenoid | CYP76 | medium | borderline | CYP76__00016__sp_P0DXJ6_C7631_LOPWI |
| Pav_sc0002327.1_g250.1.br:mrna | Terpenoid | CYP76 | low | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Pav_sc0002327.1_g270.1.br:mrna | Terpenoid | CYP76 | low | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| Pav_sc0002327.1_g280.1.br:mrna | Terpenoid | CYP76 | medium | pass | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| Pav_sc0002327.1_g290.1.mk:mrna | Terpenoid | CYP76 | medium | pass | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Pav_sc0002501.1_g160.1.mk:mrna | Terpenoid | CYP76 | low | borderline | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| Pav_sc0002608.1_g040.1.br:CDS:1 | Terpenoid | CYP76 | medium | borderline | CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU |
| Pav_sc0002608.1_g070.1.br:CDS:1 | Terpenoid | CYP76 | medium | borderline | CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU |
| Pav_sc0002608.1_g090.1.mk:mrna | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Pav_sc0002701.1_g080.1.mk:mrna | Terpenoid | CYP76 | low | borderline | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| Pav_sc0002771.1_g010.1.br:mrna | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Pav_sc0002862.1_g060.1.mk:mrna | Terpenoid | CYP76 | medium | pass | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| Pav_sc0002863.1_g030.1.mk:CDS:1 | Terpenoid | CYP76 | low | borderline | CYP76__00024__sp_W0FKI0_DOX1_PERHD |