PlantSME Plant secondary metabolism enzyme database

Prunus avium (prunus_avium)

Imported from atlas release summary for Prunus avium.

1762
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 577 18 UGT (221) View species results
Alkaloid pathway 425 26 7DLGT (113) View species results
Phenylpropanoid pathway 315 12 POD (100) View species results
Flavonoid pathway 212 15 UFGT (141) View species results
Rosmarinic acid pathway 158 7 C4H (57) View species results
Steroid pathway 75 13 CAS (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1551 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 337 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
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Gene Pathway Family Confidence Status Best Target
Pav_sc0001203.1_g140.1.mk:mrna Alkaloid NMT low borderline NMT__00059__sp_Q9M571_PEAMT_SPIOL
Pav_sc0001222.1_g180.1.mk:mrna Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
Pav_sc0001222.1_g230.1.mk:mrna Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
Pav_sc0001222.1_g370.1.mk:CDS:1 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
Pav_sc0001251.1_g400.1.mk:mrna Alkaloid NMT medium pass NMT__00039__sp_Q84W92_ANM13_ARATH
Pav_sc0001275.1_g010.1.mk:mrna Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Pav_sc0001275.1_g580.1.mk:mrna Alkaloid NMT low borderline NMT__00017__sp_F4K1J4_ATXR7_ARATH
Pav_sc0001309.1_g610.1.mk:mrna Alkaloid NMT medium borderline NMT__00029__sp_Q42963_PMT1_TOBAC
Pav_sc0001540.1_g210.1.mk:mrna Alkaloid NMT low borderline NMT__00067__sp_Q9T0G7_SUVH9_ARATH
Pav_sc0001582.1_g240.1.br:mrna Alkaloid NMT medium borderline NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
Pav_sc0001673.1_g200.1.mk:mrna Alkaloid NMT low borderline NMT__00068__sp_Q9XI84_RBCMT_ARATH
Pav_sc0002001.1_g070.1.mk:mrna Alkaloid NMT medium pass NMT__00018__sp_I1M2U5_NAMT1_SOYBN
Pav_sc0002181.1_g270.1.mk:mrna Alkaloid NMT low borderline NMT__00055__sp_Q9FNC7_SUVR2_ARATH
Pav_sc0002208.1_g630.1.mk:mrna Alkaloid NMT medium borderline NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
Pav_sc0002208.1_g660.1.mk:mrna Alkaloid NMT medium borderline NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
Pav_sc0002208.1_g670.1.mk:mrna Alkaloid NMT medium borderline NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
Pav_sc0002319.1_g110.1.mk:mrna Alkaloid NMT medium pass NMT__00011__sp_A9X7L0_ANMT_RUTGR
Pav_sc0002716.1_g020.1.br:mrna Alkaloid NMT medium borderline NMT__00052__sp_Q9AVJ9_MXMT1_COFAR
Pav_sc0003135.1_g070.1.mk:mrna Alkaloid NMT medium pass NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
Pav_sc0003562.1_g040.1.mk:mrna Alkaloid NMT medium pass NMT__00041__sp_Q8GWT4_ANM15_ARATH
Pav_sc0003905.1_g070.1.br:mrna Alkaloid NMT medium borderline NMT__00029__sp_Q42963_PMT1_TOBAC
Pav_sc0003946.1_g060.1.mk:mrna Alkaloid NMT medium pass NMT__00066__sp_Q9SU94_ANM11_ARATH
Pav_sc0005678.1_g090.1.mk:mrna Alkaloid NMT medium borderline NMT__00070__sp_W5U2K2_NMT_CATRO
Pav_sc0007083.1_g080.1.br:CDS:1 Alkaloid NMT medium pass NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
Pav_sc0008178.1_g060.1.mk:CDS:1 Alkaloid NMT medium pass NMT__00054__sp_Q9FF80_SUVH1_ARATH
Pav_sc0012098.1_g010.1.br:CDS:1 Alkaloid NMT low borderline NMT__00048__sp_Q8W595_SUVR4_ARATH