PlantSME Plant secondary metabolism enzyme database

Prunus avium (prunus_avium)

Imported from atlas release summary for Prunus avium.

1762
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 577 18 UGT (221) View species results
Alkaloid pathway 425 26 7DLGT (113) View species results
Phenylpropanoid pathway 315 12 POD (100) View species results
Flavonoid pathway 212 15 UFGT (141) View species results
Rosmarinic acid pathway 158 7 C4H (57) View species results
Steroid pathway 75 13 CAS (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1551 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 337 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
Pav_sc0000563.1_g270.1.mk:mrna Alkaloid T3O low borderline
Pav_sc0000583.1_g020.1.mk:mrna Alkaloid T3O medium pass
Pav_sc0000661.1_g480.1.mk:mrna Alkaloid T3O medium pass
Pav_sc0000744.1_g100.1.mk:mrna Alkaloid T3O medium pass
Pav_sc0000747.1_g390.1.mk:CDS:1 Alkaloid T3O medium pass
Pav_sc0000852.1_g100.1.br:mrna Alkaloid T3O medium borderline
Pav_sc0000852.1_g200.1.mk:mrna Alkaloid T3O medium borderline
Pav_sc0000852.1_g220.1.mk:mrna Alkaloid T3O medium borderline
Pav_sc0000852.1_g900.1.mk:mrna Alkaloid T3O medium pass
Pav_sc0000866.1_g260.1.mk:mrna Alkaloid T3O medium borderline
Pav_sc0000877.1_g1900.1.br:mrna Alkaloid T3O medium borderline
Pav_sc0000890.1_g1070.1.br:mrna Alkaloid T3O medium borderline
Pav_sc0000890.1_g1120.1.mk:mrna Alkaloid T3O medium borderline
Pav_sc0000890.1_g1190.1.br:mrna Alkaloid T3O medium borderline
Pav_sc0000890.1_g1200.1.mk:mrna Alkaloid T3O medium borderline
Pav_sc0000890.1_g1220.1.br:mrna Alkaloid T3O medium borderline
Pav_sc0000890.1_g890.1.mk:CDS:1 Alkaloid T3O low borderline
Pav_sc0000898.1_g050.1.mk:mrna Alkaloid T3O medium borderline
Pav_sc0000983.1_g030.1.mk:mrna Alkaloid T3O medium pass
Pav_sc0000983.1_g070.1.br:mrna Alkaloid T3O low borderline
Pav_sc0001077.1_g400.1.mk:mrna Alkaloid T3O low borderline
Pav_sc0001080.1_g1080.1.mk:CDS:1 Alkaloid T3O medium pass
Pav_sc0001080.1_g970.1.br:CDS:1 Alkaloid T3O medium borderline
Pav_sc0001110.1_g160.1.mk:mrna Alkaloid T3O medium pass
Pav_sc0001196.1_g1060.1.mk:mrna Alkaloid T3O medium borderline
Pav_sc0001196.1_g1070.1.br:mrna Alkaloid T3O medium borderline
Pav_sc0001196.1_g1100.1.mk:mrna Alkaloid T3O medium borderline
Pav_sc0001196.1_g1130.1.mk:mrna Alkaloid T3O medium pass
Pav_sc0001196.1_g1140.1.mk:mrna Alkaloid T3O medium pass
Pav_sc0001406.1_g230.1.mk:mrna Alkaloid T3O medium pass
Pav_sc0001412.1_g170.1.mk:mrna Alkaloid T3O medium borderline
Pav_sc0001412.1_g190.1.br:CDS:1 Alkaloid T3O medium borderline
Pav_sc0001412.1_g200.1.br:mrna Alkaloid T3O medium borderline
Pav_sc0001412.1_g210.1.mk:mrna Alkaloid T3O medium borderline
Pav_sc0001412.1_g230.1.br:CDS:1 Alkaloid T3O medium borderline
Pav_sc0001440.1_g080.1.mk:mrna Alkaloid T3O medium pass
Pav_sc0001554.1_g040.1.mk:mrna Alkaloid T3O medium pass
Pav_sc0001580.1_g300.1.mk:mrna Alkaloid T3O medium borderline
Pav_sc0001710.1_g1370.1.mk:mrna Alkaloid T3O medium borderline
Pav_sc0001781.1_g140.1.mk:mrna Alkaloid T3O medium borderline
Pav_sc0002207.1_g500.1.mk:mrna Alkaloid T3O medium borderline
Pav_sc0002208.1_g780.1.mk:mrna Alkaloid T3O medium pass
Pav_sc0002230.1_g050.1.mk:mrna Alkaloid T3O medium borderline
Pav_sc0002230.1_g070.1.mk:mrna Alkaloid T3O medium borderline
Pav_sc0002230.1_g130.1.br:mrna Alkaloid T3O medium borderline
Pav_sc0002230.1_g140.1.br:CDS:1 Alkaloid T3O medium borderline
Pav_sc0002327.1_g290.1.mk:mrna Alkaloid T3O medium borderline
Pav_sc0002598.1_g020.1.br:CDS:1 Alkaloid T3O medium borderline
Pav_sc0002608.1_g010.1.mk:mrna Alkaloid T3O medium borderline
Pav_sc0002608.1_g040.1.br:CDS:1 Alkaloid T3O medium borderline